1. Home
  2. Species
  3. Micromonas pusilla
  4. Sequence
  5. XM_003062145.1

XM_003062145.1 (MicpuC2_9885, 9885)


Aliases : MicpuC2_9885, 9885

Description : Zinc finger, RING-type [Interproscan].


Gene families : OG_01_0000005 (OrthoFinder) Phylogenetic Tree(s): OG0000005_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003062145.1
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
Cz10g28200.t1 No alias Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
Sro2009_g310720.1 Contig340.g4632 Protein ligase Arkadia 0.01 OrthoFinder
SymbC1.scaffold510.4 510.4 Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
TP02G01130.1 No alias Zinc finger, RING-type [Interproscan]. 0.04 OrthoFinder
TP02G01330.1 No alias Zinc finger, RING-type [Interproscan]. 0.01 OrthoFinder
Vocar.0011s0053.1 32895230 Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
XM_002507807.1 MICPUN_60573, 60573 Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8496935.1_664 KAA8496935 E3 ubiquitin-protein ligase 0.01 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495598.1_1596 KAA8495598 E3 ubiquitin-protein ligase 0.01 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495830.1_1828 KAA8495830 Putative E3 ubiquitin-protein ligase RHC1A 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
InterPro domains Description Start Stop
IPR001841 Znf_RING 3 38
No external refs found!