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  5. XM_003062075.1

XM_003062075.1 (MicpuC2_49699, 49699)


Aliases : MicpuC2_49699, 49699

Description : Ribosomal protein L22/L17 [Interproscan].


Gene families : OG_01_0003841 (OrthoFinder) Phylogenetic Tree(s): OG0003841_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003062075.1
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001215.8 tig00001215_g7572.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.08 OrthoFinder
Cre13.g568900 30784330, RPL17 Protein biosynthesis.cytosolic ribosome.large subunit... 0.14 OrthoFinder
Cz08g22070.t1 No alias Ribosomal protein L22/L17 [Interproscan]. 0.12 OrthoFinder
Dusal.0117s00014.1 33191086 Ribosomal protein L22/L17 [Interproscan]. 0.06 OrthoFinder
EOD18576 No alias Ribosomal protein L22/L17 [Interproscan]. 0.02 OrthoFinder
OT_06G03040.1 No alias Ribosomal protein L22/L17 [Interproscan]. 0.13 OrthoFinder
PTI_15G02710.1 No alias Ribosomal protein L22/L17 [Interproscan]. 0.16 OrthoFinder
Sro490_g153560.1 Contig328.g4376 60S ribosomal protein L17 0.19 OrthoFinder
SymbC1.scaffold1979.3 1979.3 Ribosomal protein L22/L17 [Interproscan]. 0.04 OrthoFinder
TP03G04610.1 No alias Ribosomal protein L22/L17 [Interproscan]. 0.16 OrthoFinder
XM_002499746.1 MICPUN_93345, 93345 Ribosomal protein L22/L17 [Interproscan]. 0.09 OrthoFinder
lcl|LHPG02000008.1_cds_PRW56515.1_9742 PRW56515 60S ribosomal L17-2 0.02 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499482.1_8435 KAA8499482 60S ribosomal protein L17 0.09 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0004129 cytochrome-c oxidase activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
CC GO:0005740 mitochondrial envelope IEP Enrichment
CC GO:0005741 mitochondrial outer membrane IEP Enrichment
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
MF GO:0008097 5S rRNA binding IEP Enrichment
CC GO:0015934 large ribosomal subunit IEP Enrichment
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Enrichment
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
CC GO:0031967 organelle envelope IEP Enrichment
CC GO:0031968 organelle outer membrane IEP Enrichment
CC GO:0031975 envelope IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
CC GO:0044391 ribosomal subunit IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR001063 Ribosomal_L22 18 154
No external refs found!