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Aliases : MicpuC2_3608, 3608
Description : Nin one binding (NOB1) Zn-ribbon-like [Interproscan].
Gene families : OG_01_0002649 (OrthoFinder) Phylogenetic Tree(s): OG0002649_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: XM_003061944.1 | |
| Cluster | HCCA: Cluster_55 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00020964.11 | tig00020964_g16782.t1 | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.02 | OrthoFinder | |
| Cre01.g031750 | 30788745 | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.09 | OrthoFinder | |
| Cz06g29250.t1 | No alias | Ribonuclease, PIN domain [Interproscan]. | 0.06 | OrthoFinder | |
| Cz06g30010.t1 | No alias | Nin one binding (NOB1) Zn-ribbon-like [Interproscan]. | 0.06 | OrthoFinder | |
| Dusal.0174s00012.1 | 33196262 | Ribonuclease, PIN domain; Nin one binding (NOB1)... | 0.05 | OrthoFinder | |
| EOD32208 | No alias | Ribonuclease, PIN domain; Nin one binding (NOB1)... | 0.11 | OrthoFinder | |
| OT_06G04030.1 | No alias | Ribonuclease, PIN domain; Nin one binding (NOB1)... | 0.1 | OrthoFinder | |
| PTI_01G03580.1 | No alias | Ribonuclease, PIN domain; Nin one binding (NOB1)... | 0.13 | OrthoFinder | |
| Sro400_g135140.1 | Contig1256.g11757 | 20S-pre-rRNA D-site endonuclease NOB1 | 0.13 | OrthoFinder | |
| TP07G06410.1 | No alias | Nin one binding (NOB1) Zn-ribbon-like; Ribonuclease, PIN... | 0.07 | OrthoFinder | |
| Transcript_contig_89518 | 89518 | Ribonuclease, PIN domain; Nin one binding (NOB1)... | 0.05 | OrthoFinder | |
| Vocar.0001s0959.1 | 32884273 | Ribonuclease, PIN domain; Nin one binding (NOB1)... | 0.03 | OrthoFinder | |
| XM_002508093.1 | MICPUN_60565, 60565 | Ribonuclease, PIN domain; Nin one binding (NOB1)... | 0.13 | OrthoFinder | |
| lcl|BLLF01000175.1_cds_GFH08649.1_3126 | HaLaN_03641, GFH08649 | Nin one binding (NOB1) Zn-ribbon-like [Interproscan]. | 0.03 | OrthoFinder | |
| lcl|LHPG02000017.1_cds_PRW33098.1_3423 | PRW33098 | 20S-pre-rRNA D-site endonuclease nob1-like | 0.12 | OrthoFinder | |
| lcl|VRMN01000007.1_cds_KAA8493449.1_9750 | KAA8493449 | 20S-pre-rRNA D-site endonuclease nob1 | 0.05 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0001522 | pseudouridine synthesis | IEP | Enrichment |
| MF | GO:0003674 | molecular_function | IEP | Enrichment |
| MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
| MF | GO:0003723 | RNA binding | IEP | Enrichment |
| MF | GO:0003852 | 2-isopropylmalate synthase activity | IEP | Enrichment |
| MF | GO:0004408 | holocytochrome-c synthase activity | IEP | Enrichment |
| MF | GO:0004455 | ketol-acid reductoisomerase activity | IEP | Enrichment |
| MF | GO:0005488 | binding | IEP | Enrichment |
| CC | GO:0005730 | nucleolus | IEP | Enrichment |
| BP | GO:0006082 | organic acid metabolic process | IEP | Enrichment |
| BP | GO:0006551 | leucine metabolic process | IEP | Enrichment |
| MF | GO:0008519 | ammonium transmembrane transporter activity | IEP | Enrichment |
| BP | GO:0008652 | cellular amino acid biosynthetic process | IEP | Enrichment |
| BP | GO:0009081 | branched-chain amino acid metabolic process | IEP | Enrichment |
| BP | GO:0009082 | branched-chain amino acid biosynthetic process | IEP | Enrichment |
| BP | GO:0009098 | leucine biosynthetic process | IEP | Enrichment |
| BP | GO:0009451 | RNA modification | IEP | Enrichment |
| MF | GO:0009982 | pseudouridine synthase activity | IEP | Enrichment |
| BP | GO:0015696 | ammonium transport | IEP | Enrichment |
| BP | GO:0016053 | organic acid biosynthetic process | IEP | Enrichment |
| MF | GO:0016846 | carbon-sulfur lyase activity | IEP | Enrichment |
| MF | GO:0016866 | intramolecular transferase activity | IEP | Enrichment |
| BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Enrichment |
| MF | GO:0031072 | heat shock protein binding | IEP | Enrichment |
| CC | GO:0032040 | small-subunit processome | IEP | Enrichment |
| MF | GO:0035596 | methylthiotransferase activity | IEP | Enrichment |
| BP | GO:0042254 | ribosome biogenesis | IEP | Enrichment |
| CC | GO:0043226 | organelle | IEP | Enrichment |
| CC | GO:0043227 | membrane-bounded organelle | IEP | Enrichment |
| CC | GO:0043229 | intracellular organelle | IEP | Enrichment |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Enrichment |
| BP | GO:0044085 | cellular component biogenesis | IEP | Enrichment |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Enrichment |
| BP | GO:0044283 | small molecule biosynthetic process | IEP | Enrichment |
| BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | Enrichment |
| MF | GO:0046912 | acyltransferase, acyl groups converted into alkyl on transfer | IEP | Enrichment |
| MF | GO:0050497 | alkylthioltransferase activity | IEP | Enrichment |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | Enrichment |
| MF | GO:0051540 | metal cluster binding | IEP | Enrichment |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | Enrichment |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Enrichment |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR014881 | NOB1_Zn-bd | 150 | 219 |
| No external refs found! |