XM_003061732.1 (MicpuC2_51325, 51325)


Aliases : MicpuC2_51325, 51325

Description : Ribosomal protein L25, beta domain; Ribosomal protein L25 [Interproscan].


Gene families : OG_01_0004015 (OrthoFinder) Phylogenetic Tree(s): OG0004015_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003061732.1
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
Cre02.g081450 30785504 No description available 0.04 OrthoFinder
Cz14g16130.t1 No alias Ribosomal protein L25, beta domain; Ribosomal protein... 0.02 OrthoFinder
Vocar.0004s0468.1 32889981 Ribosomal protein L25, beta domain [Interproscan]. 0.02 OrthoFinder
XM_002508936.1 MICPUN_63216, 63216 Ribosomal protein L25; Ribosomal protein L25, beta... 0.03 OrthoFinder
lcl|LHPG02000004.1_cds_PRW59407.1_7477 PRW59407 50S ribosomal L25 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
MF GO:0008097 5S rRNA binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0003954 NADH dehydrogenase activity IEP Enrichment
MF GO:0003955 NAD(P)H dehydrogenase (quinone) activity IEP Enrichment
MF GO:0004408 holocytochrome-c synthase activity IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006354 DNA-templated transcription, elongation IEP Enrichment
BP GO:0006366 transcription by RNA polymerase II IEP Enrichment
BP GO:0006368 transcription elongation from RNA polymerase II promoter IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
CC GO:0008023 transcription elongation factor complex IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Enrichment
MF GO:0008452 RNA ligase activity IEP Enrichment
BP GO:0009116 nucleoside metabolic process IEP Enrichment
CC GO:0015934 large ribosomal subunit IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
CC GO:0016593 Cdc73/Paf1 complex IEP Enrichment
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Enrichment
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Enrichment
MF GO:0016846 carbon-sulfur lyase activity IEP Enrichment
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
MF GO:0019899 enzyme binding IEP Enrichment
BP GO:0022900 electron transport chain IEP Enrichment
BP GO:0022904 respiratory electron transport chain IEP Enrichment
MF GO:0031625 ubiquitin protein ligase binding IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
MF GO:0044389 ubiquitin-like protein ligase binding IEP Enrichment
CC GO:0044391 ribosomal subunit IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1901657 glycosyl compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR029751 Ribosomal_L25 66 157
IPR020057 Ribosomal_L25_b-dom 165 250
No external refs found!