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  5. XM_003061374.1

XM_003061374.1 (MicpuC2_48234, 48234)


Aliases : MicpuC2_48234, 48234

Description : Glutamyl-tRNA reductase chloroplast precursor (HEMA)


Gene families : OG_01_0003394 (OrthoFinder) Phylogenetic Tree(s): OG0003394_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003061374.1
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
Cre07.g342150 30774890, HEM1 Coenzyme metabolism.tetrapyrrol... 0.05 OrthoFinder
Cz03g02090.t1 No alias Tetrapyrrole biosynthesis, glutamyl-tRNA reductase,... 0.08 OrthoFinder
Dusal.0002s00012.1 33188005 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA... 0.02 OrthoFinder
OT_11G00700.1 No alias Tetrapyrrole biosynthesis, glutamyl-tRNA reductase,... 0.11 OrthoFinder
PTI_02G05810.1 No alias Tetrapyrrole biosynthesis, glutamyl-tRNA reductase,... 0.03 OrthoFinder
Sro361_g126400.1 Contig1094.g10565 Glutamyl-tRNA reductase 0.04 OrthoFinder
TP04G09070.1 No alias Tetrapyrrole biosynthesis, glutamyl-tRNA reductase,... 0.04 OrthoFinder
Vocar.0067s0036.1 32884125 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase,... 0.02 OrthoFinder
XM_002509293.1 MICPUN_62986, 62986 Glutamyl-tRNA reductase (HEMA) 0.05 OrthoFinder
lcl|LHPG02000002.1_cds_PRW60735.1_4789 PRW60735 Glutamyl-trna reductase 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0008883 glutamyl-tRNA reductase activity IEA Interproscan
BP GO:0033014 tetrapyrrole biosynthetic process IEA Interproscan
MF GO:0050661 NADP binding IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Enrichment
MF GO:0005506 iron ion binding IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
BP GO:0006720 isoprenoid metabolic process IEP Enrichment
BP GO:0008299 isoprenoid biosynthetic process IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
CC GO:0009507 chloroplast IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009522 photosystem I IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
CC GO:0009536 plastid IEP Enrichment
CC GO:0009538 photosystem I reaction center IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
BP GO:0010109 regulation of photosynthesis IEP Enrichment
BP GO:0010207 photosystem II assembly IEP Enrichment
MF GO:0010242 oxygen evolving activity IEP Enrichment
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Enrichment
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
BP GO:0019684 photosynthesis, light reaction IEP Enrichment
MF GO:0020037 heme binding IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0042548 regulation of photosynthesis, light reaction IEP Enrichment
BP GO:0042549 photosystem II stabilization IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
InterPro domains Description Start Stop
IPR006151 Shikm_DH/Glu-tRNA_Rdtase 184 323
IPR015896 4pyrrol_synth_GluRdtase_dimer 338 442
IPR015895 4pyrrol_synth_GluRdtase_N 18 168
No external refs found!