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  5. XM_003061317.1

XM_003061317.1 (MicpuC2_50949, 50949)


Aliases : MicpuC2_50949, 50949

Description : K Homology domain, type 1; Splicing factor 1, helix-hairpin domain; RNA recognition motif domain [Interproscan].


Gene families : OG_01_0001291 (OrthoFinder) Phylogenetic Tree(s): OG0001291_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003061317.1
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
Cre12.g553750 30793213 RNA processing.RNA splicing.U2-type-intron-specific... 0.01 OrthoFinder
Dusal.0009s00049.1 33190467 Splicing factor 1, helix-hairpin domain; K Homology... 0.02 OrthoFinder
OT_12G00040.1 No alias Splicing factor 1, helix-hairpin domain; RNA recognition... 0.02 OrthoFinder
Sro59_g034220.1 Contig571.g7268 Branchpoint-bridging protein 0.02 OrthoFinder
UNPLg00623.t1 No alias K Homology domain, type 1; Splicing factor 1,... 0.02 OrthoFinder
lcl|BLLF01000769.1_cds_GFH14808.1_9285 HaLaN_10928, GFH14808 RRM domain-containing protein 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Enrichment
MF GO:0004133 glycogen debranching enzyme activity IEP Enrichment
MF GO:0004134 4-alpha-glucanotransferase activity IEP Enrichment
MF GO:0004177 aminopeptidase activity IEP Enrichment
MF GO:0004834 tryptophan synthase activity IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006568 tryptophan metabolic process IEP Enrichment
BP GO:0006576 cellular biogenic amine metabolic process IEP Enrichment
BP GO:0006586 indolalkylamine metabolic process IEP Enrichment
BP GO:0006813 potassium ion transport IEP Enrichment
BP GO:0009308 amine metabolic process IEP Enrichment
MF GO:0015291 secondary active transmembrane transporter activity IEP Enrichment
MF GO:0015297 antiporter activity IEP Enrichment
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
BP GO:0042430 indole-containing compound metabolic process IEP Enrichment
BP GO:0044106 cellular amine metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR032570 SF1-HH 254 335
IPR004088 KH_dom_type_1 354 424
IPR000504 RRM_dom 567 636
No external refs found!