XM_003061290.1 (MicpuC2_35134, 35134)


Aliases : MicpuC2_35134, 35134

Description : ABC transporter-like; Chromo domain [Interproscan].


Gene families : OG_01_0000392 (OrthoFinder) Phylogenetic Tree(s): OG0000392_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003061290.1
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
Cre14.g615950 30776520 ABC transporter F family member 3 OS=Arabidopsis thaliana 0.03 OrthoFinder
PTI_01G08900.1 No alias ABC transporter-like [Interproscan]. 0.03 OrthoFinder
Sro4_g003470.1 Contig3815.g29265 EIF-2-alpha kinase activator GCN1 0.03 OrthoFinder
Sro672_g185120.1 Contig919.g9660 [NU+] prion formation protein 1 0.01 OrthoFinder
TP05G07430.1 No alias Hypothetical protein 0.01 OrthoFinder
XM_002504129.1 MICPUN_113371, 113371 ABC transporter 0.1 OrthoFinder
lcl|BLLF01000024.1_cds_GFH06140.1_617 HaLaN_00719, GFH06140 ABC transporter-like [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
MF GO:0004674 protein serine/threonine kinase activity IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR023780 Chromo_domain 794 833
IPR003439 ABC_transporter-like_ATP-bd 429 560
IPR003439 ABC_transporter-like_ATP-bd 677 912
No external refs found!