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  5. XM_003061271.1

XM_003061271.1 (MicpuC2_60934, 60934)


Aliases : MicpuC2_60934, 60934

Description : tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 [Interproscan].


Gene families : OG_01_0004180 (OrthoFinder) Phylogenetic Tree(s): OG0004180_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003061271.1
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001107.1 tig00001107_g7088.t1 RNA processing.RNA modification.rRNA/tRNA... 0.02 OrthoFinder
Cre12.g543100 30792753 RNA processing.RNA modification.rRNA/tRNA... 0.06 OrthoFinder
Cz07g21060.t1 No alias tRNA (adenine(58)-N(1))-methyltransferase non-catalytic... 0.02 OrthoFinder
EOD37366 No alias tRNA (adenine(58)-N(1))-methyltransferase non-catalytic... 0.03 OrthoFinder
OT_05G03670.1 No alias tRNA (adenine(58)-N(1))-methyltransferase non-catalytic... 0.04 OrthoFinder
PTI_28G00370.1 No alias tRNA (adenine(58)-N(1))-methyltransferase non-catalytic... 0.02 OrthoFinder
XM_002506620.1 MICPUN_104523, 104523 tRNA (adenine(58)-N(1))-methyltransferase non-catalytic... 0.1 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0030488 tRNA methylation IEA Interproscan
CC GO:0031515 tRNA (m1A) methyltransferase complex IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0004813 alanine-tRNA ligase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005730 nucleolus IEP Enrichment
BP GO:0006419 alanyl-tRNA aminoacylation IEP Enrichment
BP GO:0006771 riboflavin metabolic process IEP Enrichment
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEP Enrichment
BP GO:0009231 riboflavin biosynthetic process IEP Enrichment
CC GO:0009349 riboflavin synthase complex IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016706 2-oxoglutarate-dependent dioxygenase activity IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0031406 carboxylic acid binding IEP Enrichment
MF GO:0031418 L-ascorbic acid binding IEP Enrichment
CC GO:0032040 small-subunit processome IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0042726 flavin-containing compound metabolic process IEP Enrichment
BP GO:0042727 flavin-containing compound biosynthetic process IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
MF GO:0043177 organic acid binding IEP Enrichment
MF GO:0048029 monosaccharide binding IEP Enrichment
MF GO:0051213 dioxygenase activity IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR017423 TRM6 124 378
No external refs found!