Aliases : MicpuC2_44623, 44623
Description : Helicase, C-terminal; DEAD/DEAH box helicase domain [Interproscan].
Gene families : OG_01_0001221 (OrthoFinder) Phylogenetic Tree(s): OG0001221_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: XM_003061132.1 | |
Cluster | HCCA: Cluster_14 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cpa|evm.model.tig00021122.18 | tig00021122_g18449.t1 | DEAD-box ATP-dependent RNA helicase 36 OS=Arabidopsis thaliana | 0.02 | OrthoFinder | |
Cre12.g505200 | 30792990 | DEAD-box ATP-dependent RNA helicase 10 OS=Oryza sativa... | 0.06 | OrthoFinder | |
Cz02g41230.t1 | No alias | Helicase, C-terminal; DEAD/DEAH box helicase domain... | 0.02 | OrthoFinder | |
EOD20644 | No alias | Helicase, C-terminal; DEAD/DEAH box helicase domain... | 0.02 | OrthoFinder | |
OT_12G00590.1 | No alias | Helicase, C-terminal; DEAD/DEAH box helicase domain... | 0.06 | OrthoFinder | |
PTI_14G02610.1 | No alias | Helicase, C-terminal; DEAD/DEAH box helicase domain... | 0.06 | OrthoFinder | |
Sro82_g043770.1 | Contig4032.g30968 | Dependent RNA helicase | 0.07 | OrthoFinder | |
Transcript_contig_56905 | 56905 | Helicase, C-terminal; DEAD/DEAH box helicase domain... | 0.02 | OrthoFinder | |
Vocar.0016s0296.1 | 32898205 | DEAD/DEAH box helicase domain; Helicase, C-terminal... | 0.03 | OrthoFinder | |
XM_002503117.1 | MICPUN_83132, 83132 | Dead-box ATP-dependent RNA helicase | 0.07 | OrthoFinder | |
XM_002507248.1 | MICPUN_107362, 107362 | Dead-box ATP-dependent RNA helicase (DDX49) | 0.02 | OrthoFinder | |
lcl|LHPG02000008.1_cds_PRW56671.1_9850 | PRW56671 | DEAD-box ATP-dependent RNA helicase 10 | 0.05 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
MF | GO:0005524 | ATP binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000287 | magnesium ion binding | IEP | Enrichment |
MF | GO:0004743 | pyruvate kinase activity | IEP | Enrichment |
CC | GO:0005634 | nucleus | IEP | Enrichment |
CC | GO:0005730 | nucleolus | IEP | Enrichment |
BP | GO:0006090 | pyruvate metabolic process | IEP | Enrichment |
BP | GO:0006096 | glycolytic process | IEP | Enrichment |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Enrichment |
BP | GO:0006165 | nucleoside diphosphate phosphorylation | IEP | Enrichment |
BP | GO:0006396 | RNA processing | IEP | Enrichment |
BP | GO:0006400 | tRNA modification | IEP | Enrichment |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Enrichment |
BP | GO:0006757 | ATP generation from ADP | IEP | Enrichment |
MF | GO:0008134 | transcription factor binding | IEP | Enrichment |
BP | GO:0009132 | nucleoside diphosphate metabolic process | IEP | Enrichment |
BP | GO:0009135 | purine nucleoside diphosphate metabolic process | IEP | Enrichment |
BP | GO:0009179 | purine ribonucleoside diphosphate metabolic process | IEP | Enrichment |
BP | GO:0009185 | ribonucleoside diphosphate metabolic process | IEP | Enrichment |
BP | GO:0016052 | carbohydrate catabolic process | IEP | Enrichment |
BP | GO:0016070 | RNA metabolic process | IEP | Enrichment |
MF | GO:0016763 | pentosyltransferase activity | IEP | Enrichment |
MF | GO:0016887 | ATPase | IEP | Enrichment |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Enrichment |
MF | GO:0030955 | potassium ion binding | IEP | Enrichment |
MF | GO:0031420 | alkali metal ion binding | IEP | Enrichment |
BP | GO:0034470 | ncRNA processing | IEP | Enrichment |
BP | GO:0034660 | ncRNA metabolic process | IEP | Enrichment |
BP | GO:0042254 | ribosome biogenesis | IEP | Enrichment |
CC | GO:0043226 | organelle | IEP | Enrichment |
CC | GO:0043227 | membrane-bounded organelle | IEP | Enrichment |
CC | GO:0043229 | intracellular organelle | IEP | Enrichment |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Enrichment |
BP | GO:0044085 | cellular component biogenesis | IEP | Enrichment |
BP | GO:0046031 | ADP metabolic process | IEP | Enrichment |
BP | GO:0046483 | heterocycle metabolic process | IEP | Enrichment |
BP | GO:0046939 | nucleotide phosphorylation | IEP | Enrichment |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Enrichment |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Enrichment |
No external refs found! |