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  5. XM_003061127.1

XM_003061127.1 (MicpuC2_63318, 63318)


Aliases : MicpuC2_63318, 63318

Description : Cytochrome b6-f complex subunit (PetN)


Gene families : OG_01_0005430 (OrthoFinder) Phylogenetic Tree(s): OG0005430_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003061127.1
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
Cre16.g650100 30778201, PETN Photosynthesis.photophosphorylation.cytochrome b6/f... 0.07 OrthoFinder
Cz16g12040.t1 No alias Cytochrome b6-f complex, subunit 8 [Interproscan]. 0.1 OrthoFinder
Dusal.0162s00013.1 33196127 Cytochrome b6-f complex, subunit 8 [Interproscan]. 0.02 OrthoFinder
Vocar.0032s0139.1 32893855 Cytochrome b6-f complex, subunit 8 [Interproscan]. 0.06 OrthoFinder
XM_002503114.1 MICPUN_94459, 94459 Cytochrome b6-f complex, subunit 8 [Interproscan]. 0.09 OrthoFinder
lcl|BLLF01000018.1_cds_GFH05996.1_473 HaLaN_00551, GFH05996 Cytochrome b6-f complex, subunit 8 [Interproscan]. 0.05 OrthoFinder
lcl|LHPG02000011.1_cds_PRW45325.1_1437 PRW45325 Subunit of the chloroplast cytochrome b6f complex 0.1 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0009512 cytochrome b6f complex IEA Interproscan
BP GO:0017004 cytochrome complex assembly IEA Interproscan
MF GO:0045158 electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004427 inorganic diphosphatase activity IEP Enrichment
MF GO:0004618 phosphoglycerate kinase activity IEP Enrichment
MF GO:0004635 phosphoribosyl-AMP cyclohydrolase activity IEP Enrichment
MF GO:0004751 ribose-5-phosphate isomerase activity IEP Enrichment
MF GO:0004807 triose-phosphate isomerase activity IEP Enrichment
MF GO:0005507 copper ion binding IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
BP GO:0006091 generation of precursor metabolites and energy IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009522 photosystem I IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
CC GO:0009538 photosystem I reaction center IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Enrichment
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Enrichment
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016854 racemase and epimerase activity IEP Enrichment
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Enrichment
MF GO:0016860 intramolecular oxidoreductase activity IEP Enrichment
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Enrichment
MF GO:0019238 cyclohydrolase activity IEP Enrichment
CC GO:0019898 extrinsic component of membrane IEP Enrichment
MF GO:0030145 manganese ion binding IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
CC GO:0034357 photosynthetic membrane IEP Enrichment
CC GO:0042651 thylakoid membrane IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0051920 peroxiredoxin activity IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
InterPro domains Description Start Stop
IPR005497 Cytochrome_b6-f_cplx_su8 81 107
No external refs found!