Aliases : MicpuC2_19538, 19538
Description : Photosystem II 13kD protein, chloroplast precursor (PSBW1)
Gene families : OG_01_0005372 (OrthoFinder) Phylogenetic Tree(s): OG0005372_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: XM_003061076.1 | |
Cluster | HCCA: Cluster_51 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cre10.g440450 | 30790206, PSB28 | Photosynthesis.photophosphorylation.photosystem... | 0.02 | OrthoFinder | |
Cz13g07140.t1 | No alias | Photosystem II Psb28, class 1 [Interproscan]. | 0.03 | OrthoFinder | |
Sro1425_g271500.1 | Contig1471.g13478 | II reaction center PSB28 protein | 0.03 | OrthoFinder | |
Sro374_g129320.1 | Contig347.g4693 | II reaction center PSB28 protein | 0.02 | OrthoFinder | |
Vocar.0001s1283.1 | 32884980 | Photosystem II Psb28, class 1 [Interproscan]. | 0.05 | OrthoFinder | |
XM_002503059.1 | MICPUN_82984, 82984 | Photosystem II 13kD protein, chloroplast precursor (PSBW1) | 0.03 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0009523 | photosystem II | IEA | Interproscan |
CC | GO:0009654 | photosystem II oxygen evolving complex | IEA | Interproscan |
BP | GO:0015979 | photosynthesis | IEA | Interproscan |
CC | GO:0016020 | membrane | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004618 | phosphoglycerate kinase activity | IEP | Enrichment |
MF | GO:0004751 | ribose-5-phosphate isomerase activity | IEP | Enrichment |
MF | GO:0004807 | triose-phosphate isomerase activity | IEP | Enrichment |
MF | GO:0005509 | calcium ion binding | IEP | Enrichment |
BP | GO:0006091 | generation of precursor metabolites and energy | IEP | Enrichment |
MF | GO:0008113 | peptide-methionine (S)-S-oxide reductase activity | IEP | Enrichment |
BP | GO:0009052 | pentose-phosphate shunt, non-oxidative branch | IEP | Enrichment |
MF | GO:0009055 | electron transfer activity | IEP | Enrichment |
CC | GO:0009512 | cytochrome b6f complex | IEP | Enrichment |
CC | GO:0009522 | photosystem I | IEP | Enrichment |
CC | GO:0009538 | photosystem I reaction center | IEP | Enrichment |
BP | GO:0010207 | photosystem II assembly | IEP | Enrichment |
MF | GO:0016671 | oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | IEP | Enrichment |
MF | GO:0016774 | phosphotransferase activity, carboxyl group as acceptor | IEP | Enrichment |
MF | GO:0016853 | isomerase activity | IEP | Enrichment |
MF | GO:0016860 | intramolecular oxidoreductase activity | IEP | Enrichment |
MF | GO:0016861 | intramolecular oxidoreductase activity, interconverting aldoses and ketoses | IEP | Enrichment |
BP | GO:0017004 | cytochrome complex assembly | IEP | Enrichment |
CC | GO:0019898 | extrinsic component of membrane | IEP | Enrichment |
BP | GO:0022607 | cellular component assembly | IEP | Enrichment |
MF | GO:0030145 | manganese ion binding | IEP | Enrichment |
CC | GO:0034357 | photosynthetic membrane | IEP | Enrichment |
BP | GO:0034622 | cellular protein-containing complex assembly | IEP | Enrichment |
CC | GO:0042651 | thylakoid membrane | IEP | Enrichment |
MF | GO:0043169 | cation binding | IEP | Enrichment |
BP | GO:0043933 | protein-containing complex subunit organization | IEP | Enrichment |
MF | GO:0045158 | electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity | IEP | Enrichment |
MF | GO:0046872 | metal ion binding | IEP | Enrichment |
BP | GO:0065003 | protein-containing complex assembly | IEP | Enrichment |
CC | GO:0070069 | cytochrome complex | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR005610 | PSII_Psb28_class-1 | 43 | 148 |
No external refs found! |