XM_003060896.1 (MicpuC2_60700, 60700)


Aliases : MicpuC2_60700, 60700

Description : DNA replication factor RFC1, C-terminal; ATPase, AAA-type, core; BRCT domain [Interproscan].


Gene families : OG_01_0002804 (OrthoFinder) Phylogenetic Tree(s): OG0002804_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003060896.1
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021017.29 tig00021017_g17203.t1 Cell cycle.interphase.DNA... 0.04 OrthoFinder
Cre12.g521200 30793594, RFC1 Cell cycle.interphase.DNA... 0.05 OrthoFinder
Dusal.0540s00007.1 33202830 Hypothetical protein 0.02 OrthoFinder
EOD33929 No alias Putative clamp loader replication factor C subunit 1 [Ensembl]. 0.07 OrthoFinder
Sro827_g207800.1 Contig2896.g23085 Factor C subunit 1 0.06 OrthoFinder
SymbC1.scaffold5212.2 5212.2 ATPase, AAA-type, core; DNA replication factor RFC1,... 0.01 OrthoFinder
Transcript_contig_56181 56181 BRCT domain [Interproscan]. 0.01 OrthoFinder
XM_002502778.1 MICPUN_59230, 59230 BRCT domain; ATPase, AAA-type, core; DNA replication... 0.09 OrthoFinder
lcl|LHPG02000005.1_cds_PRW58492.1_8174 PRW58492 Replication factor C subunit 1 0.04 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495911.1_1909 KAA8495911 Replication factor C subunit 1 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003689 DNA clamp loader activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0005663 DNA replication factor C complex IEA Interproscan
BP GO:0006260 DNA replication IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP Enrichment
MF GO:0000295 adenine nucleotide transmembrane transporter activity IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003690 double-stranded DNA binding IEP Enrichment
MF GO:0003896 DNA primase activity IEP Enrichment
MF GO:0003909 DNA ligase activity IEP Enrichment
MF GO:0003910 DNA ligase (ATP) activity IEP Enrichment
MF GO:0004146 dihydrofolate reductase activity IEP Enrichment
MF GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity IEP Enrichment
MF GO:0004645 1,4-alpha-oligoglucan phosphorylase activity IEP Enrichment
MF GO:0005346 purine ribonucleotide transmembrane transporter activity IEP Enrichment
MF GO:0005347 ATP transmembrane transporter activity IEP Enrichment
MF GO:0005471 ATP:ADP antiporter activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005815 microtubule organizing center IEP Enrichment
BP GO:0006098 pentose-phosphate shunt IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006269 DNA replication, synthesis of RNA primer IEP Enrichment
BP GO:0006275 regulation of DNA replication IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006298 mismatch repair IEP Enrichment
BP GO:0006333 chromatin assembly or disassembly IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0006606 protein import into nucleus IEP Enrichment
BP GO:0006739 NADP metabolic process IEP Enrichment
BP GO:0006740 NADPH regeneration IEP Enrichment
BP GO:0006760 folic acid-containing compound metabolic process IEP Enrichment
BP GO:0006862 nucleotide transport IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
BP GO:0007010 cytoskeleton organization IEP Enrichment
BP GO:0007021 tubulin complex assembly IEP Enrichment
BP GO:0007023 post-chaperonin tubulin folding pathway IEP Enrichment
MF GO:0008080 N-acetyltransferase activity IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
MF GO:0008184 glycogen phosphorylase activity IEP Enrichment
MF GO:0008514 organic anion transmembrane transporter activity IEP Enrichment
BP GO:0009092 homoserine metabolic process IEP Enrichment
BP GO:0009396 folic acid-containing compound biosynthetic process IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
MF GO:0015215 nucleotide transmembrane transporter activity IEP Enrichment
MF GO:0015216 purine nucleotide transmembrane transporter activity IEP Enrichment
MF GO:0015217 ADP transmembrane transporter activity IEP Enrichment
MF GO:0015301 anion:anion antiporter activity IEP Enrichment
MF GO:0015605 organophosphate ester transmembrane transporter activity IEP Enrichment
BP GO:0015748 organophosphate ester transport IEP Enrichment
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
CC GO:0016272 prefoldin complex IEP Enrichment
MF GO:0016407 acetyltransferase activity IEP Enrichment
MF GO:0016410 N-acyltransferase activity IEP Enrichment
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP Enrichment
MF GO:0016597 amino acid binding IEP Enrichment
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Enrichment
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Enrichment
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP Enrichment
MF GO:0016746 acyltransferase activity IEP Enrichment
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP Enrichment
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Enrichment
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Enrichment
MF GO:0019207 kinase regulator activity IEP Enrichment
BP GO:0019346 transsulfuration IEP Enrichment
MF GO:0019887 protein kinase regulator activity IEP Enrichment
MF GO:0030983 mismatched DNA binding IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
BP GO:0034453 microtubule anchoring IEP Enrichment
BP GO:0034504 protein localization to nucleus IEP Enrichment
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Enrichment
MF GO:0043177 organic acid binding IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0046653 tetrahydrofolate metabolic process IEP Enrichment
BP GO:0046654 tetrahydrofolate biosynthetic process IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
MF GO:0048487 beta-tubulin binding IEP Enrichment
BP GO:0050667 homocysteine metabolic process IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051156 glucose 6-phosphate metabolic process IEP Enrichment
BP GO:0051170 import into nucleus IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
MF GO:0061608 nuclear import signal receptor activity IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
MF GO:0140104 molecular carrier activity IEP Enrichment
MF GO:0140142 nucleocytoplasmic carrier activity IEP Enrichment
MF GO:0140323 solute:anion antiporter activity IEP Enrichment
MF GO:0140597 protein carrier activity IEP Enrichment
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR001357 BRCT_dom 222 295
IPR013725 DNA_replication_fac_RFC1_C 687 859
IPR003959 ATPase_AAA_core 422 531
No external refs found!