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  5. XM_003060531.1

XM_003060531.1 (MicpuC2_7648, 7648)


Aliases : MicpuC2_7648, 7648

Description : Sel1-like repeat; Tetratricopeptide repeat [Interproscan].


Gene families : OG_01_0000979 (OrthoFinder) Phylogenetic Tree(s): OG0000979_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003060531.1
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
XM_003054712.1 MicpuC2_49782, 49782 Sel1-like repeat [Interproscan]. 0.07 OrthoFinder
XM_003055097.1 MicpuC2_50597, 50597 Sel1-like repeat [Interproscan]. 0.11 OrthoFinder
XM_003055513.1 MicpuC2_50339, 50339 Sel1-like repeat [Interproscan]. 0.04 OrthoFinder
XM_003055556.1 MicpuC2_12520, 12520 Sel1-like repeat; Tetratricopeptide repeat [Interproscan]. 0.1 OrthoFinder
XM_003055764.1 MicpuC2_50892, 50892 Hypothetical protein 0.09 OrthoFinder
XM_003061393.1 MicpuC2_51128, 51128 Sel1-like repeat [Interproscan]. 0.07 OrthoFinder
XM_003062014.1 MicpuC2_51924, 51924 Sel1-like repeat [Interproscan]. 0.07 OrthoFinder
XM_003062352.1 MicpuC2_52228, 52228 Hypothetical protein 0.06 OrthoFinder
XM_003062524.1 MicpuC2_52087, 52087 Hypothetical protein 0.06 OrthoFinder
XM_003062873.1 MicpuC2_52819, 52819 Sel1-like repeat [Interproscan]. 0.1 OrthoFinder
XM_003063252.1 MicpuC2_53201, 53201 Sel1-like repeat [Interproscan]. 0.05 OrthoFinder
XM_003063268.1 MicpuC2_53236, 53236 Hypothetical protein 0.07 OrthoFinder
XM_003063296.1 MicpuC2_53296, 53296 Sel1-like repeat [Interproscan]. 0.05 OrthoFinder
XM_003063484.1 MicpuC2_22202, 22202 Sel1-like repeat; Tetratricopeptide repeat [Interproscan]. 0.04 OrthoFinder
XM_003063695.1 MicpuC2_53713, 53713 Sel1-like repeat [Interproscan]. 0.07 OrthoFinder
XM_003063710.1 MicpuC2_53355, 53355 Hypothetical protein 0.06 OrthoFinder
XM_003063978.1 MicpuC2_53959, 53959 Sel1-like repeat [Interproscan]. 0.09 OrthoFinder
XM_003064338.1 MicpuC2_23467, 23467 Sel1-like repeat [Interproscan]. 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP Enrichment
BP GO:0007275 multicellular organism development IEP Enrichment
BP GO:0032501 multicellular organismal process IEP Enrichment
BP GO:0032502 developmental process IEP Enrichment
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Enrichment
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP Enrichment
BP GO:0048856 anatomical structure development IEP Enrichment
InterPro domains Description Start Stop
IPR019734 TPR_repeat 51 77
IPR019734 TPR_repeat 120 145
IPR006597 Sel1-like 2 13
IPR006597 Sel1-like 84 118
IPR006597 Sel1-like 18 50
No external refs found!