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  5. XM_003060424.1

XM_003060424.1 (MicpuC2_19130, 19130)


Aliases : MicpuC2_19130, 19130

Description : Rvb1-like protein


Gene families : OG_01_0000819 (OrthoFinder) Phylogenetic Tree(s): OG0000819_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003060424.1
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000350.28 tig00000350_g24328.t1 Chromatin organisation.chromatin remodeling... 0.02 OrthoFinder
Cpa|evm.model.tig00000836.8 tig00000836_g4692.t1 Chromatin organisation.chromatin remodeling... 0.06 OrthoFinder
Cre10.g442700 30789854 Chromatin organisation.chromatin remodeling... 0.02 OrthoFinder
Cz06g05110.t1 No alias TIP49, P-loop domain; RuvB-like, AAA-lid domain [Interproscan]. 0.02 OrthoFinder
Cz06g35240.t1 No alias TIP49, P-loop domain; RuvB-like, AAA-lid domain [Interproscan]. 0.02 OrthoFinder
EOD15209 No alias RuvB-like, AAA-lid domain [Interproscan]. 0.02 OrthoFinder
TP03G04100.1 No alias TIP49, P-loop domain; RuvB-like, AAA-lid domain [Interproscan]. 0.04 OrthoFinder
TP12G02390.1 No alias TIP49, P-loop domain; RuvB-like, AAA-lid domain [Interproscan]. 0.05 OrthoFinder
Vocar.0001s1219.1 32885488 RuvB-like, AAA-lid domain; TIP49, P-loop domain [Interproscan]. 0.02 OrthoFinder
XM_002505536.1 MICPUN_98268, 98268 Rvb2-like protein 0.03 OrthoFinder
lcl|BLLF01000815.1_cds_GFH15176.1_9653 HaLaN_11355, GFH15176 RuvB-like helicase 0.01 OrthoFinder
lcl|LHPG02000014.1_cds_PRW39102.1_2725 PRW39102 RuvB-like 2 0.02 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498499.1_7452 KAA8498499 RuvB-like 1 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003678 DNA helicase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP Enrichment
CC GO:0000124 SAGA complex IEP Enrichment
MF GO:0001671 ATPase activator activity IEP Enrichment
MF GO:0003682 chromatin binding IEP Enrichment
MF GO:0003713 transcription coactivator activity IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
MF GO:0004620 phospholipase activity IEP Enrichment
MF GO:0004623 phospholipase A2 activity IEP Enrichment
MF GO:0004784 superoxide dismutase activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005576 extracellular region IEP Enrichment
CC GO:0005643 nuclear pore IEP Enrichment
CC GO:0005750 mitochondrial respiratory chain complex III IEP Enrichment
CC GO:0005759 mitochondrial matrix IEP Enrichment
CC GO:0005783 endoplasmic reticulum IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
BP GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c IEP Enrichment
BP GO:0006338 chromatin remodeling IEP Enrichment
BP GO:0006405 RNA export from nucleus IEP Enrichment
BP GO:0006406 mRNA export from nucleus IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0006801 superoxide metabolic process IEP Enrichment
MF GO:0008047 enzyme activator activity IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
BP GO:0009060 aerobic respiration IEP Enrichment
BP GO:0009891 positive regulation of biosynthetic process IEP Enrichment
BP GO:0009893 positive regulation of metabolic process IEP Enrichment
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0010604 positive regulation of macromolecule metabolic process IEP Enrichment
BP GO:0015980 energy derivation by oxidation of organic compounds IEP Enrichment
BP GO:0016042 lipid catabolic process IEP Enrichment
CC GO:0016272 prefoldin complex IEP Enrichment
MF GO:0016298 lipase activity IEP Enrichment
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Enrichment
MF GO:0016746 acyltransferase activity IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
BP GO:0019646 aerobic electron transport chain IEP Enrichment
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
BP GO:0022900 electron transport chain IEP Enrichment
BP GO:0022904 respiratory electron transport chain IEP Enrichment
MF GO:0030145 manganese ion binding IEP Enrichment
MF GO:0030234 enzyme regulator activity IEP Enrichment
MF GO:0031072 heat shock protein binding IEP Enrichment
CC GO:0031248 protein acetyltransferase complex IEP Enrichment
BP GO:0031325 positive regulation of cellular metabolic process IEP Enrichment
BP GO:0031328 positive regulation of cellular biosynthetic process IEP Enrichment
MF GO:0031491 nucleosome binding IEP Enrichment
CC GO:0031974 membrane-enclosed lumen IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0043044 ATP-dependent chromatin remodeling IEP Enrichment
CC GO:0043233 organelle lumen IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
CC GO:0045275 respiratory chain complex III IEP Enrichment
BP GO:0045333 cellular respiration IEP Enrichment
BP GO:0045893 positive regulation of transcription, DNA-templated IEP Enrichment
BP GO:0045935 positive regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0048518 positive regulation of biological process IEP Enrichment
BP GO:0048522 positive regulation of cellular process IEP Enrichment
BP GO:0050657 nucleic acid transport IEP Enrichment
BP GO:0050658 RNA transport IEP Enrichment
BP GO:0051028 mRNA transport IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
MF GO:0051087 chaperone binding IEP Enrichment
BP GO:0051168 nuclear export IEP Enrichment
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051236 establishment of RNA localization IEP Enrichment
BP GO:0051254 positive regulation of RNA metabolic process IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Enrichment
MF GO:0060590 ATPase regulator activity IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
CC GO:0070013 intracellular organelle lumen IEP Enrichment
CC GO:0070069 cytochrome complex IEP Enrichment
CC GO:0070461 SAGA-type complex IEP Enrichment
BP GO:0072593 reactive oxygen species metabolic process IEP Enrichment
MF GO:0098772 molecular function regulator IEP Enrichment
CC GO:0098803 respiratory chain complex IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
CC GO:1902493 acetyltransferase complex IEP Enrichment
BP GO:1902680 positive regulation of RNA biosynthetic process IEP Enrichment
BP GO:1903508 positive regulation of nucleic acid-templated transcription IEP Enrichment
InterPro domains Description Start Stop
IPR010339 TIP49_P-loop 14 368
IPR041048 RuvB-like_C 374 439
No external refs found!