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  5. XM_003060202.1

XM_003060202.1 (MicpuC2_59836, 59836)


Aliases : MicpuC2_59836, 59836

Description : Sel1-like repeat; F-box domain [Interproscan].


Gene families : OG_01_0000979 (OrthoFinder) Phylogenetic Tree(s): OG0000979_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003060202.1
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
XM_003054712.1 MicpuC2_49782, 49782 Sel1-like repeat [Interproscan]. 0.03 OrthoFinder
XM_003055097.1 MicpuC2_50597, 50597 Sel1-like repeat [Interproscan]. 0.04 OrthoFinder
XM_003055513.1 MicpuC2_50339, 50339 Sel1-like repeat [Interproscan]. 0.03 OrthoFinder
XM_003055556.1 MicpuC2_12520, 12520 Sel1-like repeat; Tetratricopeptide repeat [Interproscan]. 0.04 OrthoFinder
XM_003055764.1 MicpuC2_50892, 50892 Hypothetical protein 0.04 OrthoFinder
XM_003061393.1 MicpuC2_51128, 51128 Sel1-like repeat [Interproscan]. 0.03 OrthoFinder
XM_003062014.1 MicpuC2_51924, 51924 Sel1-like repeat [Interproscan]. 0.06 OrthoFinder
XM_003062352.1 MicpuC2_52228, 52228 Hypothetical protein 0.04 OrthoFinder
XM_003062524.1 MicpuC2_52087, 52087 Hypothetical protein 0.04 OrthoFinder
XM_003062873.1 MicpuC2_52819, 52819 Sel1-like repeat [Interproscan]. 0.04 OrthoFinder
XM_003063252.1 MicpuC2_53201, 53201 Sel1-like repeat [Interproscan]. 0.03 OrthoFinder
XM_003063484.1 MicpuC2_22202, 22202 Sel1-like repeat; Tetratricopeptide repeat [Interproscan]. 0.04 OrthoFinder
XM_003063695.1 MicpuC2_53713, 53713 Sel1-like repeat [Interproscan]. 0.06 OrthoFinder
XM_003063710.1 MicpuC2_53355, 53355 Hypothetical protein 0.05 OrthoFinder
XM_003063978.1 MicpuC2_53959, 53959 Sel1-like repeat [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP Enrichment
MF GO:0008146 sulfotransferase activity IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP Enrichment
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
InterPro domains Description Start Stop
IPR001810 F-box_dom 1 42
IPR006597 Sel1-like 163 192
IPR006597 Sel1-like 147 156
IPR006597 Sel1-like 209 219
No external refs found!