- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : MicpuC2_34341, 34341
Description : Histone deacetylase
Gene families : OG_01_0000505 (OrthoFinder) Phylogenetic Tree(s): OG0000505_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: XM_003060106.1 | |
| Cluster | HCCA: Cluster_67 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00000113.44 | tig00000215_g18663.t1 | Chromatin organisation.histone modifications.histone... | 0.02 | OrthoFinder | |
| Cpa|evm.model.tig00000215.121 | tig00000215_g18663.t1 | Chromatin organisation.histone modifications.histone... | 0.02 | OrthoFinder | |
| Cre09.g387393 | 30780858 | Chromatin organisation.histone modifications.histone... | 0.02 | OrthoFinder | |
| Cz09g16010.t1 | No alias | Histone deacetylase domain [Interproscan]. | 0.01 | OrthoFinder | |
| Dusal.0001s00049.1 | 33198829 | Histone deacetylase domain [Interproscan]. | 0.01 | OrthoFinder | |
| Dusal.0020s00020.1 | 33193729 | Histone deacetylase domain [Interproscan]. | 0.02 | OrthoFinder | |
| EOD03651 | No alias | Histone deacetylase domain [Interproscan]. | 0.02 | OrthoFinder | |
| EOD14941 | No alias | Histone deacetylase 1 [Ensembl]. | 0.02 | OrthoFinder | |
| EOD19100 | No alias | Histone deacetylase domain [Interproscan]. | 0.02 | OrthoFinder | |
| Sro388_g132310.1 | Contig4393.g33005 | Probable histone deacetylase 1-B | 0.02 | OrthoFinder | |
| XM_002500456.1 | MICPUN_79903, 79903 | Histone deacetylase | 0.06 | OrthoFinder | |
| lcl|VRMN01000001.1_cds_KAA8499079.1_8032 | KAA8499079 | Histone deacetylase 1 | 0.01 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0001671 | ATPase activator activity | IEP | Enrichment |
| MF | GO:0003674 | molecular_function | IEP | Enrichment |
| MF | GO:0003723 | RNA binding | IEP | Enrichment |
| MF | GO:0004340 | glucokinase activity | IEP | Enrichment |
| MF | GO:0004396 | hexokinase activity | IEP | Enrichment |
| MF | GO:0004576 | oligosaccharyl transferase activity | IEP | Enrichment |
| MF | GO:0004620 | phospholipase activity | IEP | Enrichment |
| MF | GO:0004623 | phospholipase A2 activity | IEP | Enrichment |
| MF | GO:0004784 | superoxide dismutase activity | IEP | Enrichment |
| MF | GO:0005048 | signal sequence binding | IEP | Enrichment |
| MF | GO:0005488 | binding | IEP | Enrichment |
| MF | GO:0005536 | glucose binding | IEP | Enrichment |
| CC | GO:0005575 | cellular_component | IEP | Enrichment |
| CC | GO:0005576 | extracellular region | IEP | Enrichment |
| CC | GO:0005786 | signal recognition particle, endoplasmic reticulum targeting | IEP | Enrichment |
| BP | GO:0006351 | transcription, DNA-templated | IEP | Enrichment |
| BP | GO:0006605 | protein targeting | IEP | Enrichment |
| BP | GO:0006801 | superoxide metabolic process | IEP | Enrichment |
| BP | GO:0006810 | transport | IEP | Enrichment |
| BP | GO:0006886 | intracellular protein transport | IEP | Enrichment |
| BP | GO:0008104 | protein localization | IEP | Enrichment |
| MF | GO:0008312 | 7S RNA binding | IEP | Enrichment |
| BP | GO:0015031 | protein transport | IEP | Enrichment |
| CC | GO:0016020 | membrane | IEP | Enrichment |
| BP | GO:0016042 | lipid catabolic process | IEP | Enrichment |
| MF | GO:0016298 | lipase activity | IEP | Enrichment |
| MF | GO:0016301 | kinase activity | IEP | Enrichment |
| BP | GO:0016310 | phosphorylation | IEP | Enrichment |
| MF | GO:0016721 | oxidoreductase activity, acting on superoxide radicals as acceptor | IEP | Enrichment |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Enrichment |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | Enrichment |
| MF | GO:0019200 | carbohydrate kinase activity | IEP | Enrichment |
| CC | GO:0030127 | COPII vesicle coat | IEP | Enrichment |
| MF | GO:0030145 | manganese ion binding | IEP | Enrichment |
| MF | GO:0030942 | endoplasmic reticulum signal peptide binding | IEP | Enrichment |
| BP | GO:0033036 | macromolecule localization | IEP | Enrichment |
| MF | GO:0042277 | peptide binding | IEP | Enrichment |
| BP | GO:0045184 | establishment of protein localization | IEP | Enrichment |
| BP | GO:0046907 | intracellular transport | IEP | Enrichment |
| MF | GO:0048029 | monosaccharide binding | IEP | Enrichment |
| CC | GO:0048500 | signal recognition particle | IEP | Enrichment |
| MF | GO:0051087 | chaperone binding | IEP | Enrichment |
| BP | GO:0051156 | glucose 6-phosphate metabolic process | IEP | Enrichment |
| BP | GO:0051179 | localization | IEP | Enrichment |
| BP | GO:0051234 | establishment of localization | IEP | Enrichment |
| BP | GO:0051641 | cellular localization | IEP | Enrichment |
| BP | GO:0051649 | establishment of localization in cell | IEP | Enrichment |
| BP | GO:0071702 | organic substance transport | IEP | Enrichment |
| BP | GO:0071705 | nitrogen compound transport | IEP | Enrichment |
| BP | GO:0072593 | reactive oxygen species metabolic process | IEP | Enrichment |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | Enrichment |
| CC | GO:0110165 | cellular anatomical entity | IEP | Enrichment |
| BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR023801 | His_deacetylse_dom | 25 | 317 |
| No external refs found! |