1. Home
  2. Species
  3. Micromonas pusilla
  4. Sequence
  5. XM_003060040.1

XM_003060040.1 (MicpuC2_59476, 59476)


Aliases : MicpuC2_59476, 59476

Description : ATP-dependent clp protease


Gene families : OG_01_0000068 (OrthoFinder) Phylogenetic Tree(s): OG0000068_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003060040.1
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
Dusal.0219s00011.1 33193390 ATPase, AAA-type, core; ClpA/ClpB, AAA lid domain; Clp... 0.02 OrthoFinder
Vocar.0001s1199.1 32884396 ClpA/ClpB, AAA lid domain; ATPase, AAA-type, core; Clp,... 0.03 OrthoFinder
XM_002500953.1 MICPUN_57068, 57068 Chaperone, Hsp100 family, clpb-type 0.03 OrthoFinder
XM_002504224.1 MICPUN_61300, 61300 ATP-dependent clp protease (CLP2) 0.03 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8497588.1_6541 KAA8497588 Chaperone protein ClpB1 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Enrichment
BP GO:0005976 polysaccharide metabolic process IEP Enrichment
BP GO:0006812 cation transport IEP Enrichment
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Enrichment
MF GO:0016160 amylase activity IEP Enrichment
MF GO:0016161 beta-amylase activity IEP Enrichment
InterPro domains Description Start Stop
IPR004176 Clp_R_dom 93 118
IPR004176 Clp_R_dom 162 213
IPR003959 ATPase_AAA_core 297 413
IPR019489 Clp_ATPase_C 837 915
IPR041546 ClpA/ClpB_AAA_lid 440 552
IPR003959 ATPase_AAA_core 652 831
No external refs found!