1. Home
  2. Species
  3. Micromonas pusilla
  4. Sequence
  5. XM_003059990.1

XM_003059990.1 (MicpuC2_59374, 59374)


Aliases : MicpuC2_59374, 59374

Description : Probable Zinc-ribbon domain [Interproscan].


Gene families : OG_01_0000508 (OrthoFinder) Phylogenetic Tree(s): OG0000508_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003059990.1
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
XM_003057412.1 MicpuC2_56647, 56647 Probable Zinc-ribbon domain [Interproscan]. 0.04 OrthoFinder
XM_003061631.1 MicpuC2_51094, 51094 Probable Zinc-ribbon domain [Interproscan]. 0.05 OrthoFinder
XM_003062208.1 MicpuC2_51900, 51900 Probable Zinc-ribbon domain [Interproscan]. 0.05 OrthoFinder
XM_003062209.1 MicpuC2_51903, 51903 Probable Zinc-ribbon domain [Interproscan]. 0.05 OrthoFinder
XM_003062226.1 MicpuC2_42048, 42048 Probable Zinc-ribbon domain [Interproscan]. 0.11 OrthoFinder
XM_003063906.1 MicpuC2_53797, 53797 Probable Zinc-ribbon domain [Interproscan]. 0.05 OrthoFinder
XM_003063984.1 MicpuC2_53973, 53973 Probable Zinc-ribbon domain [Interproscan]. 0.04 OrthoFinder
XM_003064037.1 MicpuC2_54084, 54084 Probable Zinc-ribbon domain [Interproscan]. 0.05 OrthoFinder
XM_003064174.1 MicpuC2_53979, 53979 Probable Zinc-ribbon domain [Interproscan]. 0.02 OrthoFinder
XM_003064214.1 MicpuC2_54065, 54065 Probable Zinc-ribbon domain [Interproscan]. 0.04 OrthoFinder
XM_003064254.1 MicpuC2_54158, 54158 Probable Zinc-ribbon domain [Interproscan]. 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003690 double-stranded DNA binding IEP Enrichment
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Enrichment
BP GO:0006298 mismatch repair IEP Enrichment
MF GO:0030983 mismatched DNA binding IEP Enrichment
InterPro domains Description Start Stop
IPR025487 DUF4379 65 117
IPR025487 DUF4379 225 277
IPR025487 DUF4379 146 199
No external refs found!