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  5. XM_003059798.1

XM_003059798.1 (MicpuC2_27663, 27663)


Aliases : MicpuC2_27663, 27663

Description : Proteasome, subunit alpha/beta [Interproscan].


Gene families : OG_01_0002503 (OrthoFinder) Phylogenetic Tree(s): OG0002503_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003059798.1
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
Cre10.g424400 30789754 Protein degradation.26S proteasome.20S core... 0.09 OrthoFinder
Cz01g21220.t1 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.06 OrthoFinder
Dusal.0023s00001.1 33198027 Proteasome, subunit alpha/beta [Interproscan]. 0.02 OrthoFinder
EOD26305 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.02 OrthoFinder
PTI_08G00690.1 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.08 OrthoFinder
Sro25_g016920.1 Contig1417.g13031 Beta type-7 0.11 OrthoFinder
TP16G01250.1 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.07 OrthoFinder
Transcript_contig_55787 55787 Proteasome, subunit alpha/beta [Interproscan]. 0.02 OrthoFinder
XM_002504489.1 MICPUN_107407, 107407 Hypothetical protein (PSB7) 0.05 OrthoFinder
lcl|BLLF01001402.1_cds_GFH19077.1_13554 HaLaN_15969, GFH19077 Proteasome subunit beta 0.02 OrthoFinder
lcl|LHPG02000006.1_cds_PRW57945.1_8500 PRW57945 Proteasome subunit beta type-7-A 0.03 OrthoFinder
lcl|VRMN01000008.1_cds_KAA8492784.1_2520 KAA8492784 Proteasome subunit beta type-7-B 0.08 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004298 threonine-type endopeptidase activity IEA Interproscan
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Enrichment
CC GO:0000152 nuclear ubiquitin ligase complex IEP Enrichment
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003682 chromatin binding IEP Enrichment
MF GO:0004645 1,4-alpha-oligoglucan phosphorylase activity IEP Enrichment
MF GO:0004784 superoxide dismutase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005680 anaphase-promoting complex IEP Enrichment
CC GO:0005759 mitochondrial matrix IEP Enrichment
BP GO:0006325 chromatin organization IEP Enrichment
BP GO:0006338 chromatin remodeling IEP Enrichment
BP GO:0006405 RNA export from nucleus IEP Enrichment
BP GO:0006406 mRNA export from nucleus IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006476 protein deacetylation IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0006801 superoxide metabolic process IEP Enrichment
MF GO:0008184 glycogen phosphorylase activity IEP Enrichment
CC GO:0008541 proteasome regulatory particle, lid subcomplex IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
CC GO:0016272 prefoldin complex IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
BP GO:0016575 histone deacetylation IEP Enrichment
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016746 acyltransferase activity IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0031072 heat shock protein binding IEP Enrichment
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Enrichment
MF GO:0031491 nucleosome binding IEP Enrichment
CC GO:0031974 membrane-enclosed lumen IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
BP GO:0035601 protein deacylation IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
BP GO:0043044 ATP-dependent chromatin remodeling IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
CC GO:0043233 organelle lumen IEP Enrichment
BP GO:0043248 proteasome assembly IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
BP GO:0050657 nucleic acid transport IEP Enrichment
BP GO:0050658 RNA transport IEP Enrichment
BP GO:0051028 mRNA transport IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
BP GO:0051168 nuclear export IEP Enrichment
BP GO:0051236 establishment of RNA localization IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
CC GO:0070013 intracellular organelle lumen IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
BP GO:0072593 reactive oxygen species metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
BP GO:0098732 macromolecule deacylation IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 13 194
No external refs found!