1. Home
  2. Species
  3. Micromonas pusilla
  4. Sequence
  5. XM_003059649.1

XM_003059649.1 (MicpuC2_18633, 18633)


Aliases : MicpuC2_18633, 18633

Description : Mur ligase, N-terminal catalytic domain; Mur ligase, central; Mur ligase, C-terminal [Interproscan].


Gene families : OG_01_0003485 (OrthoFinder) Phylogenetic Tree(s): OG0003485_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003059649.1
Cluster HCCA: Cluster_86

Target Alias Description ECC score Gene Family Method Actions
Cre12.g519900 30791765 RNA biosynthesis.organelle machineries.RNA polymerase... 0.03 OrthoFinder
Cz05g20010.t1 No alias Mur ligase, C-terminal; Mur ligase, central [Interproscan]. 0.02 OrthoFinder
OT_14G02500.1 No alias Mur ligase, C-terminal; Mur ligase, central [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold2.1731 2.1731 Mur ligase, N-terminal catalytic domain; Mur ligase,... 0.01 OrthoFinder
XM_002505375.1 MICPUN_67737, 67737 Mur ligase, central; Mur ligase, C-terminal; Mur ligase,... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0009058 biosynthetic process IEA Interproscan
MF GO:0016874 ligase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0001534 radial spoke IEP Enrichment
BP GO:0003341 cilium movement IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004674 protein serine/threonine kinase activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
MF GO:0005543 phospholipid binding IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
MF GO:0008759 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity IEP Enrichment
BP GO:0009245 lipid A biosynthetic process IEP Enrichment
BP GO:0009311 oligosaccharide metabolic process IEP Enrichment
BP GO:0009312 oligosaccharide biosynthetic process IEP Enrichment
BP GO:0016051 carbohydrate biosynthetic process IEP Enrichment
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
MF GO:0019213 deacetylase activity IEP Enrichment
BP GO:0030030 cell projection organization IEP Enrichment
BP GO:0030031 cell projection assembly IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0044782 cilium organization IEP Enrichment
BP GO:0046493 lipid A metabolic process IEP Enrichment
BP GO:0060271 cilium assembly IEP Enrichment
BP GO:0060294 cilium movement involved in cell motility IEP Enrichment
BP GO:0070925 organelle assembly IEP Enrichment
BP GO:0120031 plasma membrane bounded cell projection assembly IEP Enrichment
BP GO:0120036 plasma membrane bounded cell projection organization IEP Enrichment
BP GO:1901269 lipooligosaccharide metabolic process IEP Enrichment
BP GO:1901271 lipooligosaccharide biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR000713 Mur_ligase_N 114 189
IPR004101 Mur_ligase_C 431 513
IPR013221 Mur_ligase_cen 201 410
No external refs found!