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  5. XM_003059554.1

XM_003059554.1 (MicpuC2_59031, 59031)


Aliases : MicpuC2_59031, 59031

Description : Ribosome biogenesis protein Nop16 [Interproscan].


Gene families : OG_01_0003168 (OrthoFinder) Phylogenetic Tree(s): OG0003168_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003059554.1
Cluster HCCA: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
OT_04G04370.1 No alias Ribosome biogenesis protein Nop16 [Interproscan]. 0.03 OrthoFinder
Sro1032_g233580.1 Contig2177.g18186 Ribosome biogenesis protein Nop16 [Interproscan]. 0.02 OrthoFinder
XM_002504021.1 MICPUN_60312, 60312 Ribosome biogenesis protein Nop16 [Interproscan]. 0.03 OrthoFinder
lcl|LHPG02000003.1_cds_PRW59920.1_6303 PRW59920 Nucleolar 16 0.02 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8494529.1_3059 KAA8494529 Nucleolar protein 16 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0004427 inorganic diphosphatase activity IEP Enrichment
MF GO:0004486 methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity IEP Enrichment
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEP Enrichment
MF GO:0004743 pyruvate kinase activity IEP Enrichment
CC GO:0005730 nucleolus IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
CC GO:0016459 myosin complex IEP Enrichment
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Enrichment
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Enrichment
CC GO:0030684 preribosome IEP Enrichment
CC GO:0030688 preribosome, small subunit precursor IEP Enrichment
MF GO:0030955 potassium ion binding IEP Enrichment
MF GO:0031420 alkali metal ion binding IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR019002 Ribosome_biogenesis_Nop16 121 172
No external refs found!