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  5. XM_003059512.1

XM_003059512.1 (MicpuC2_1194, 1194)


Aliases : MicpuC2_1194, 1194

Description : Helicase, C-terminal; SNF2-related, N-terminal domain [Interproscan].


Gene families : OG_01_0000285 (OrthoFinder) Phylogenetic Tree(s): OG0000285_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003059512.1
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000605.2 tig00000605_g2468.t1 DNA repair and recombination protein RAD54 OS=Oryza... 0.02 OrthoFinder
Cpa|evm.model.tig00020614.39 tig00020614_g12152.t1 Chromatin organisation.chromatin remodeling... 0.02 OrthoFinder
Cre10.g430950 30790110 Chromatin organisation.chromatin remodeling... 0.02 OrthoFinder
EOD21201 No alias SNF2-related, N-terminal domain [Interproscan]. 0.03 OrthoFinder
EOD37408 No alias SNF2-related, N-terminal domain [Interproscan]. 0.03 OrthoFinder
EOD38972 No alias Helicase, C-terminal; SNF2-related, N-terminal domain... 0.03 OrthoFinder
OT_08G04010.1 No alias Helicase, C-terminal; SNF2-related, N-terminal domain... 0.02 OrthoFinder
OT_09G03540.1 No alias Helicase, C-terminal; SNF2-related, N-terminal domain... 0.02 OrthoFinder
Vocar.0063s0045.1 32883497 Helicase, C-terminal; SNF2-related, N-terminal domain... 0.03 OrthoFinder
XM_002499964.1 MICPUN_99013, 99013 SNF2 super family (RAD54B) 0.05 OrthoFinder
XM_002502147.1 MICPUN_58699, 58699 SNF2 super family 0.04 OrthoFinder
XM_002508265.1 MICPUN_60933, 60933 SNF2 super family (RAD54) 0.04 OrthoFinder
lcl|LHPG02000003.1_cds_PRW60078.1_6612 PRW60078 Transcriptional regulator ATRX 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint signaling IEP Enrichment
BP GO:0000077 DNA damage checkpoint signaling IEP Enrichment
BP GO:0000226 microtubule cytoskeleton organization IEP Enrichment
MF GO:0000295 adenine nucleotide transmembrane transporter activity IEP Enrichment
CC GO:0000808 origin recognition complex IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003779 actin binding IEP Enrichment
MF GO:0003896 DNA primase activity IEP Enrichment
MF GO:0003909 DNA ligase activity IEP Enrichment
MF GO:0003910 DNA ligase (ATP) activity IEP Enrichment
MF GO:0005049 nuclear export signal receptor activity IEP Enrichment
MF GO:0005346 purine ribonucleotide transmembrane transporter activity IEP Enrichment
MF GO:0005347 ATP transmembrane transporter activity IEP Enrichment
MF GO:0005471 ATP:ADP antiporter activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
CC GO:0005815 microtubule organizing center IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006269 DNA replication, synthesis of RNA primer IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006333 chromatin assembly or disassembly IEP Enrichment
BP GO:0006862 nucleotide transport IEP Enrichment
BP GO:0006904 vesicle docking involved in exocytosis IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
BP GO:0007010 cytoskeleton organization IEP Enrichment
BP GO:0007021 tubulin complex assembly IEP Enrichment
BP GO:0007023 post-chaperonin tubulin folding pathway IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
MF GO:0008514 organic anion transmembrane transporter activity IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0010948 negative regulation of cell cycle process IEP Enrichment
MF GO:0015215 nucleotide transmembrane transporter activity IEP Enrichment
MF GO:0015216 purine nucleotide transmembrane transporter activity IEP Enrichment
MF GO:0015217 ADP transmembrane transporter activity IEP Enrichment
MF GO:0015301 anion:anion antiporter activity IEP Enrichment
MF GO:0015605 organophosphate ester transmembrane transporter activity IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
BP GO:0015748 organophosphate ester transport IEP Enrichment
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
MF GO:0016597 amino acid binding IEP Enrichment
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP Enrichment
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Enrichment
BP GO:0022406 membrane docking IEP Enrichment
CC GO:0030896 checkpoint clamp complex IEP Enrichment
BP GO:0031570 DNA integrity checkpoint signaling IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
BP GO:0034453 microtubule anchoring IEP Enrichment
BP GO:0042770 signal transduction in response to DNA damage IEP Enrichment
MF GO:0043015 gamma-tubulin binding IEP Enrichment
MF GO:0043177 organic acid binding IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0045786 negative regulation of cell cycle IEP Enrichment
BP GO:0048278 vesicle docking IEP Enrichment
MF GO:0048487 beta-tubulin binding IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051640 organelle localization IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
BP GO:0140029 exocytic process IEP Enrichment
BP GO:0140056 organelle localization by membrane tethering IEP Enrichment
MF GO:0140104 molecular carrier activity IEP Enrichment
MF GO:0140142 nucleocytoplasmic carrier activity IEP Enrichment
MF GO:0140323 solute:anion antiporter activity IEP Enrichment
MF GO:0140597 protein carrier activity IEP Enrichment
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Enrichment
BP GO:1901987 regulation of cell cycle phase transition IEP Enrichment
BP GO:1901988 negative regulation of cell cycle phase transition IEP Enrichment
InterPro domains Description Start Stop
IPR000330 SNF2_N 57 317
IPR001650 Helicase_C 392 501
No external refs found!