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  5. XM_003059418.1

XM_003059418.1 (MicpuC2_33859, 33859)


Aliases : MicpuC2_33859, 33859

Description : Proliferating cell nuclear antigen, PCNA, C-terminal; Proliferating cell nuclear antigen, PCNA, N-terminal [Interproscan].


Gene families : OG_01_0001486 (OrthoFinder) Phylogenetic Tree(s): OG0001486_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003059418.1
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020553.141 tig00020553_g10631.t1 Cell cycle.interphase.DNA... 0.09 OrthoFinder
Cpa|evm.model.tig00021319.67 tig00021319_g20259.t1 Cell cycle.interphase.DNA... 0.09 OrthoFinder
Cre12.g515850 30793407, PCN1 Cell cycle.interphase.DNA... 0.06 OrthoFinder
Cz03g35210.t1 No alias Proliferating cell nuclear antigen, PCNA, C-terminal;... 0.05 OrthoFinder
Dusal.0073s00022.1 33194576 Proliferating cell nuclear antigen, PCNA, C-terminal;... 0.04 OrthoFinder
EOD29149 No alias Proliferating cell nuclear antigen, PCNA, C-terminal;... 0.04 OrthoFinder
OT_06G02920.1 No alias Proliferating cell nuclear antigen, PCNA, C-terminal;... 0.09 OrthoFinder
Sro57_g033090.1 Contig284.g3677 Proliferating cell nuclear antigen 0.05 OrthoFinder
TP03G00410.1 No alias Proliferating cell nuclear antigen, PCNA, N-terminal;... 0.03 OrthoFinder
Vocar.0006s0320.1 32894384 Proliferating cell nuclear antigen, PCNA, N-terminal;... 0.02 OrthoFinder
Vocar.0006s0321.1 32893962 Proliferating cell nuclear antigen, PCNA, N-terminal;... 0.03 OrthoFinder
XM_002500833.1 MICPUN_93665, 93665 Proliferating cell nuclear antigen, PCNA, N-terminal;... 0.14 OrthoFinder
lcl|BLLF01002000.1_cds_GFH22252.1_16729 HaLaN_19687, GFH22252 Proliferating cell nuclear antigen 0.02 OrthoFinder
lcl|LHPG02000011.1_cds_PRW45431.1_1402 PRW45431 Proliferating cell nuclear antigen 0.02 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499918.1_8871 KAA8499918 Proliferating cell nuclear antigen 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006275 regulation of DNA replication IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP Enrichment
MF GO:0003689 DNA clamp loader activity IEP Enrichment
MF GO:0003779 actin binding IEP Enrichment
MF GO:0003896 DNA primase activity IEP Enrichment
MF GO:0004146 dihydrofolate reductase activity IEP Enrichment
MF GO:0004556 alpha-amylase activity IEP Enrichment
MF GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity IEP Enrichment
MF GO:0004797 thymidine kinase activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005663 DNA replication factor C complex IEP Enrichment
CC GO:0005815 microtubule organizing center IEP Enrichment
BP GO:0006098 pentose-phosphate shunt IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006269 DNA replication, synthesis of RNA primer IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006333 chromatin assembly or disassembly IEP Enrichment
BP GO:0006606 protein import into nucleus IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006739 NADP metabolic process IEP Enrichment
BP GO:0006740 NADPH regeneration IEP Enrichment
BP GO:0006760 folic acid-containing compound metabolic process IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
BP GO:0007010 cytoskeleton organization IEP Enrichment
BP GO:0007021 tubulin complex assembly IEP Enrichment
BP GO:0007023 post-chaperonin tubulin folding pathway IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009262 deoxyribonucleotide metabolic process IEP Enrichment
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP Enrichment
BP GO:0009396 folic acid-containing compound biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP Enrichment
MF GO:0016597 amino acid binding IEP Enrichment
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Enrichment
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Enrichment
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP Enrichment
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Enrichment
MF GO:0019136 deoxynucleoside kinase activity IEP Enrichment
MF GO:0019205 nucleobase-containing compound kinase activity IEP Enrichment
MF GO:0019206 nucleoside kinase activity IEP Enrichment
MF GO:0019207 kinase regulator activity IEP Enrichment
MF GO:0019887 protein kinase regulator activity IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
BP GO:0034453 microtubule anchoring IEP Enrichment
BP GO:0034504 protein localization to nucleus IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Enrichment
CC GO:0042575 DNA polymerase complex IEP Enrichment
MF GO:0043177 organic acid binding IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
CC GO:0043625 delta DNA polymerase complex IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0046653 tetrahydrofolate metabolic process IEP Enrichment
BP GO:0046654 tetrahydrofolate biosynthetic process IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
MF GO:0048487 beta-tubulin binding IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051156 glucose 6-phosphate metabolic process IEP Enrichment
BP GO:0051170 import into nucleus IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
MF GO:0061608 nuclear import signal receptor activity IEP Enrichment
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
MF GO:0140104 molecular carrier activity IEP Enrichment
MF GO:0140142 nucleocytoplasmic carrier activity IEP Enrichment
MF GO:0140597 protein carrier activity IEP Enrichment
BP GO:1901135 carbohydrate derivative metabolic process IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR022648 Pr_cel_nuc_antig_N 1 124
IPR022649 Pr_cel_nuc_antig_C 127 253
No external refs found!