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  5. XM_003058919.1

XM_003058919.1 (MicpuC2_27001, 27001)


Aliases : MicpuC2_27001, 27001

Description : EF-hand domain [Interproscan].


Gene families : OG_01_0000037 (OrthoFinder) Phylogenetic Tree(s): OG0000037_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003058919.1
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000692.65 tig00000692_g3264.t1 Calmodulin-2 OS=Oryza sativa subsp. japonica 0.02 OrthoFinder
Cpa|evm.model.tig00021435.44 tig00021435_g21427.t1 Calmodulin OS=Mougeotia scalaris 0.02 OrthoFinder
Cz04g38280.t1 No alias EF-hand domain [Interproscan]. 0.02 OrthoFinder
EOD14806 No alias EF-hand domain [Interproscan]. 0.02 OrthoFinder
EOD16975 No alias EF-hand domain [Interproscan]. 0.02 OrthoFinder
Sro1012_g231150.1 Contig304.g3985 Calmodulin-5/6/7/8 0.02 OrthoFinder
Sro2020_g311360.1 Contig280.g3625 Myosin light chain 1/3, skeletal muscle isoform 0.02 OrthoFinder
SymbC1.scaffold1032.3 1032.3 EF-hand domain; EF-hand domain pair [Interproscan]. 0.01 OrthoFinder
TP07G01950.1 No alias EF-hand domain [Interproscan]. 0.02 OrthoFinder
XM_002507084.1 MICPUN_104708, 104708 Calmodulin (CAM) 0.03 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8497936.1_6889 KAA8497936 Calmodulin 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Enrichment
MF GO:0004089 carbonate dehydratase activity IEP Enrichment
MF GO:0005543 phospholipid binding IEP Enrichment
BP GO:0018193 peptidyl-amino acid modification IEP Enrichment
BP GO:0018208 peptidyl-proline modification IEP Enrichment
MF GO:0035091 phosphatidylinositol binding IEP Enrichment
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 32 95
IPR002048 EF_hand_dom 105 167
No external refs found!