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  5. XM_003058867.1

XM_003058867.1 (MicpuC2_4172, 4172)


Aliases : MicpuC2_4172, 4172

Description : XPG N-terminal; XPG-I domain [Interproscan].


Gene families : OG_01_0001910 (OrthoFinder) Phylogenetic Tree(s): OG0001910_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003058867.1
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001214.13 tig00001214_g7555.t1 DNA damage response.DNA repair mechanisms.base excision... 0.04 OrthoFinder
Cre03.g145687 30787113 DNA damage response.DNA repair mechanisms.base excision... 0.05 OrthoFinder
Cz02g04010.t1 No alias XPG N-terminal; XPG-I domain [Interproscan]. 0.06 OrthoFinder
Cz02g04020.t1 No alias Hypothetical protein 0.02 OrthoFinder
EOD20908 No alias XPG-I domain; XPG N-terminal [Interproscan]. 0.05 OrthoFinder
OT_08G02290.1 No alias XPG N-terminal; XPG-I domain [Interproscan]. 0.03 OrthoFinder
Sro292_g109630.1 Contig484.g6533 Flap endonuclease 1 0.06 OrthoFinder
SymbC1.scaffold4715.2 4715.2 XPG-I domain; XPG N-terminal [Interproscan]. 0.03 OrthoFinder
TP08G01810.1 No alias XPG N-terminal; XPG-I domain [Interproscan]. 0.02 OrthoFinder
Vocar.0014s0084.1 32888481 XPG N-terminal; XPG-I domain [Interproscan]. 0.04 OrthoFinder
XM_002501708.1 MICPUN_96332, 96332 Flap endonuclease-1 (FEN1) 0.07 OrthoFinder
lcl|VRMN01000011.1_cds_KAA8491873.1_4881 KAA8491873 Flap endonuclease 1 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint signaling IEP Enrichment
BP GO:0000077 DNA damage checkpoint signaling IEP Enrichment
MF GO:0000166 nucleotide binding IEP Enrichment
BP GO:0000226 microtubule cytoskeleton organization IEP Enrichment
CC GO:0000808 origin recognition complex IEP Enrichment
MF GO:0003779 actin binding IEP Enrichment
MF GO:0003896 DNA primase activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004146 dihydrofolate reductase activity IEP Enrichment
MF GO:0004797 thymidine kinase activity IEP Enrichment
MF GO:0005049 nuclear export signal receptor activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005815 microtubule organizing center IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006269 DNA replication, synthesis of RNA primer IEP Enrichment
BP GO:0006275 regulation of DNA replication IEP Enrichment
BP GO:0006333 chromatin assembly or disassembly IEP Enrichment
BP GO:0006760 folic acid-containing compound metabolic process IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
BP GO:0007010 cytoskeleton organization IEP Enrichment
BP GO:0007021 tubulin complex assembly IEP Enrichment
BP GO:0007023 post-chaperonin tubulin folding pathway IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
BP GO:0009262 deoxyribonucleotide metabolic process IEP Enrichment
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP Enrichment
BP GO:0009396 folic acid-containing compound biosynthetic process IEP Enrichment
BP GO:0010948 negative regulation of cell cycle process IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
MF GO:0016597 amino acid binding IEP Enrichment
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Enrichment
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0019136 deoxynucleoside kinase activity IEP Enrichment
MF GO:0019205 nucleobase-containing compound kinase activity IEP Enrichment
MF GO:0019206 nucleoside kinase activity IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
CC GO:0030896 checkpoint clamp complex IEP Enrichment
BP GO:0031570 DNA integrity checkpoint signaling IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0034453 microtubule anchoring IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Enrichment
BP GO:0042770 signal transduction in response to DNA damage IEP Enrichment
MF GO:0043015 gamma-tubulin binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
MF GO:0043177 organic acid binding IEP Enrichment
BP GO:0045786 negative regulation of cell cycle IEP Enrichment
BP GO:0046653 tetrahydrofolate metabolic process IEP Enrichment
BP GO:0046654 tetrahydrofolate biosynthetic process IEP Enrichment
MF GO:0048487 beta-tubulin binding IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0140104 molecular carrier activity IEP Enrichment
MF GO:0140142 nucleocytoplasmic carrier activity IEP Enrichment
MF GO:0140597 protein carrier activity IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901987 regulation of cell cycle phase transition IEP Enrichment
BP GO:1901988 negative regulation of cell cycle phase transition IEP Enrichment
InterPro domains Description Start Stop
IPR006086 XPG-I_dom 147 234
IPR006085 XPG_DNA_repair_N 1 108
No external refs found!