- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : MicpuC2_70781, 70781
Description : RAP domain [Interproscan].
Gene families : OG_01_0000025 (OrthoFinder) Phylogenetic Tree(s): OG0000025_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: XM_003058842.1 | |
| Cluster | HCCA: Cluster_99 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cz08g16170.t1 | No alias | Hypothetical protein | 0.02 | OrthoFinder | |
| Cz19g02050.t1 | No alias | RAP domain [Interproscan]. | 0.02 | OrthoFinder | |
| Transcript_contig_57634 | 57634 | Hypothetical protein | 0.01 | OrthoFinder | |
| Vocar.0001s0054.1 | 32884222 | RAP domain [Interproscan]. | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000350 | generation of catalytic spliceosome for second transesterification step | IEP | Enrichment |
| MF | GO:0004556 | alpha-amylase activity | IEP | Enrichment |
| MF | GO:0005488 | binding | IEP | Enrichment |
| BP | GO:0006396 | RNA processing | IEP | Enrichment |
| MF | GO:0016160 | amylase activity | IEP | Enrichment |
| MF | GO:0016706 | 2-oxoglutarate-dependent dioxygenase activity | IEP | Enrichment |
| MF | GO:0017150 | tRNA dihydrouridine synthase activity | IEP | Enrichment |
| BP | GO:0022618 | ribonucleoprotein complex assembly | IEP | Enrichment |
| CC | GO:0030684 | preribosome | IEP | Enrichment |
| MF | GO:0031406 | carboxylic acid binding | IEP | Enrichment |
| MF | GO:0031418 | L-ascorbic acid binding | IEP | Enrichment |
| CC | GO:0032040 | small-subunit processome | IEP | Enrichment |
| BP | GO:0034470 | ncRNA processing | IEP | Enrichment |
| MF | GO:0042910 | xenobiotic transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0043167 | ion binding | IEP | Enrichment |
| MF | GO:0043168 | anion binding | IEP | Enrichment |
| MF | GO:0043177 | organic acid binding | IEP | Enrichment |
| MF | GO:0048029 | monosaccharide binding | IEP | Enrichment |
| MF | GO:0051213 | dioxygenase activity | IEP | Enrichment |
| BP | GO:0071826 | ribonucleoprotein complex subunit organization | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR013584 | RAP | 522 | 579 |
| No external refs found! |