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  5. XM_003058816.1

XM_003058816.1 (MicpuC2_45533, 45533)


Aliases : MicpuC2_45533, 45533

Description : ATP-binding cassette superfamily


Gene families : OG_01_0001466 (OrthoFinder) Phylogenetic Tree(s): OG0001466_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003058816.1
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
EOD12548 No alias ABC transporter-like; ABC-transporter extension domain... 0.01 OrthoFinder
EOD12867 No alias ABC transporter-like; ABC-transporter extension domain... 0.01 OrthoFinder
EOD16670 No alias ABC transporter-like [Interproscan]. 0.01 OrthoFinder
PTI_23G01670.1 No alias ABC transporter-like; ABC-transporter extension domain... 0.02 OrthoFinder
Sro1928_g305990.1 Contig2945.g23381 Tylosin resistance ATP-binding protein TlrC 0.02 OrthoFinder
Sro942_g222690.1 Contig1838.g16133 Binding protein ZnuC 0.02 OrthoFinder
Sro942_g222700.1 Contig1838.g16134 Tylosin resistance ATP-binding protein TlrC 0.02 OrthoFinder
XM_002501376.1 MICPUN_100107, 100107 ATP-binding cassette superfamily 0.04 OrthoFinder
lcl|BLLF01004500.1_cds_GFH29736.1_24213 HaLaN_28450, GFH29736 ABC transporter-like [Interproscan]. 0.01 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8494931.1_3461 KAA8494931 Putative ABC transporter ATP-binding protein YdiF 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0003333 amino acid transmembrane transport IEP Enrichment
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004807 triose-phosphate isomerase activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0004813 alanine-tRNA ligase activity IEP Enrichment
MF GO:0004832 valine-tRNA ligase activity IEP Enrichment
MF GO:0005049 nuclear export signal receptor activity IEP Enrichment
MF GO:0005506 iron ion binding IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006419 alanyl-tRNA aminoacylation IEP Enrichment
BP GO:0006438 valyl-tRNA aminoacylation IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006766 vitamin metabolic process IEP Enrichment
BP GO:0006767 water-soluble vitamin metabolic process IEP Enrichment
BP GO:0006771 riboflavin metabolic process IEP Enrichment
BP GO:0006865 amino acid transport IEP Enrichment
MF GO:0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
BP GO:0009110 vitamin biosynthetic process IEP Enrichment
BP GO:0009231 riboflavin biosynthetic process IEP Enrichment
BP GO:0009235 cobalamin metabolic process IEP Enrichment
BP GO:0009236 cobalamin biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0015035 protein-disulfide reductase activity IEP Enrichment
MF GO:0015036 disulfide oxidoreductase activity IEP Enrichment
BP GO:0015849 organic acid transport IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0019725 cellular homeostasis IEP Enrichment
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Enrichment
BP GO:0042726 flavin-containing compound metabolic process IEP Enrichment
BP GO:0042727 flavin-containing compound biosynthetic process IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0045454 cell redox homeostasis IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
MF GO:0140104 molecular carrier activity IEP Enrichment
MF GO:0140142 nucleocytoplasmic carrier activity IEP Enrichment
MF GO:0140597 protein carrier activity IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1903825 organic acid transmembrane transport IEP Enrichment
BP GO:1905039 carboxylic acid transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 364 499
IPR032781 ABC_tran_Xtn 234 303
IPR003439 ABC_transporter-like_ATP-bd 17 195
No external refs found!