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  5. XM_003058684.1

XM_003058684.1 (MicpuC2_57807, 57807)


Aliases : MicpuC2_57807, 57807

Description : K Homology domain, type 1; Splicing factor 1, helix-hairpin domain [Interproscan].


Gene families : OG_01_0001291 (OrthoFinder) Phylogenetic Tree(s): OG0001291_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003058684.1
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
Cre09.g386731 30780511 RNA processing.RNA splicing.U2-type-intron-specific... 0.03 OrthoFinder
Cz07g11130.t1 No alias K Homology domain, type 1; Splicing factor 1,... 0.02 OrthoFinder
Dusal.0246s00002.1 33197696 Splicing factor 1, helix-hairpin domain; RNA recognition... 0.02 OrthoFinder
EOD10668 No alias K Homology domain, type 1 [Interproscan]. 0.02 OrthoFinder
EOD21865 No alias K Homology domain, type 1 [Interproscan]. 0.02 OrthoFinder
OT_11G00280.1 No alias Splicing factor 1, helix-hairpin domain; K Homology... 0.02 OrthoFinder
Vocar.0008s0294.1 32897420 K Homology domain, type 1; RNA recognition motif domain;... 0.02 OrthoFinder
XM_002509359.1 MICPUN_62857, 62857 Splicing factor 1, helix-hairpin domain; K Homology... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003747 translation release factor activity IEP Enrichment
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Enrichment
MF GO:0004827 proline-tRNA ligase activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005681 spliceosomal complex IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0006415 translational termination IEP Enrichment
BP GO:0006433 prolyl-tRNA aminoacylation IEP Enrichment
MF GO:0008079 translation termination factor activity IEP Enrichment
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP Enrichment
MF GO:0008963 phospho-N-acetylmuramoyl-pentapeptide-transferase activity IEP Enrichment
BP GO:0009092 homoserine metabolic process IEP Enrichment
CC GO:0009507 chloroplast IEP Enrichment
CC GO:0009536 plastid IEP Enrichment
BP GO:0009890 negative regulation of biosynthetic process IEP Enrichment
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
CC GO:0016592 mediator complex IEP Enrichment
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Enrichment
MF GO:0017056 structural constituent of nuclear pore IEP Enrichment
BP GO:0019346 transsulfuration IEP Enrichment
BP GO:0022411 cellular component disassembly IEP Enrichment
BP GO:0031324 negative regulation of cellular metabolic process IEP Enrichment
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Enrichment
BP GO:0032984 protein-containing complex disassembly IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0043624 cellular protein complex disassembly IEP Enrichment
BP GO:0045892 negative regulation of transcription, DNA-templated IEP Enrichment
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0050667 homocysteine metabolic process IEP Enrichment
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051253 negative regulation of RNA metabolic process IEP Enrichment
BP GO:1902679 negative regulation of RNA biosynthetic process IEP Enrichment
BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR004088 KH_dom_type_1 265 334
IPR032570 SF1-HH 138 245
No external refs found!