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  5. XM_003058527.1

XM_003058527.1 (MicpuC2_44337, 44337)


Aliases : MicpuC2_44337, 44337

Description : Glycoside hydrolase family 13 protein (SBEIIB)


Gene families : OG_01_0000579 (OrthoFinder) Phylogenetic Tree(s): OG0000579_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003058527.1
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold195.3 195.3 Glycoside hydrolase, family 13, N-terminal [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold9551.1 9551.1 Hypothetical protein 0.01 OrthoFinder
Vocar.0026s0071.1 32892436 Glycosyl hydrolase, family 13, catalytic domain;... 0.01 OrthoFinder
lcl|LHPG02000002.1_cds_PRW60631.1_4500 PRW60631 Starch branching enzyme I 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
MF GO:0043169 cation binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003989 acetyl-CoA carboxylase activity IEP Enrichment
MF GO:0004176 ATP-dependent peptidase activity IEP Enrichment
BP GO:0006631 fatty acid metabolic process IEP Enrichment
BP GO:0006633 fatty acid biosynthetic process IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
MF GO:0010181 FMN binding IEP Enrichment
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Enrichment
MF GO:0016421 CoA carboxylase activity IEP Enrichment
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP Enrichment
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Enrichment
MF GO:0034061 DNA polymerase activity IEP Enrichment
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR006047 Glyco_hydro_13_cat_dom 207 279
IPR004193 Glyco_hydro_13_N 55 135
IPR006048 A-amylase/branching_C 598 686
No external refs found!