1. Home
  2. Species
  3. Micromonas pusilla
  4. Sequence
  5. XM_003058253.1

XM_003058253.1 (MicpuC2_49582, 49582)


Aliases : MicpuC2_49582, 49582

Description : Anticodon-binding; Aminoacyl-tRNA synthetase, class II (G/ P/ S/T); Threonyl/alanyl tRNA synthetase, SAD [Interproscan].


Gene families : OG_01_0001392 (OrthoFinder) Phylogenetic Tree(s): OG0001392_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003058253.1
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000169.10 tig00000169_g11882.t1 Protein biosynthesis.aminoacyl-tRNA synthetase... 0.04 OrthoFinder
Cre10.g421600 30790345 Protein biosynthesis.aminoacyl-tRNA synthetase... 0.06 OrthoFinder
EOD05458 No alias Threonine-tRNA ligase [Ensembl]. 0.01 OrthoFinder
OT_07G00280.1 No alias Anticodon-binding; Threonyl/alanyl tRNA synthetase, SAD;... 0.03 OrthoFinder
Sro185_g080510.1 Contig1228.g11526 Threonine--tRNA ligase catalytic 0.04 OrthoFinder
Transcript_contig_89963 89963 Threonyl/alanyl tRNA synthetase, SAD [Interproscan]. 0.01 OrthoFinder
Vocar.0075s0006.1 32895798 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T);... 0.02 OrthoFinder
XM_002499478.1 MICPUN_78424, 78424 Anticodon-binding; Aminoacyl-tRNA synthetase, class II... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0004812 aminoacyl-tRNA ligase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006418 tRNA aminoacylation for protein translation IEA Interproscan
BP GO:0043039 tRNA aminoacylation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0002161 aminoacyl-tRNA editing activity IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity IEP Enrichment
MF GO:0004827 proline-tRNA ligase activity IEP Enrichment
BP GO:0006072 glycerol-3-phosphate metabolic process IEP Enrichment
BP GO:0006433 prolyl-tRNA aminoacylation IEP Enrichment
MF GO:0008171 O-methyltransferase activity IEP Enrichment
CC GO:0009507 chloroplast IEP Enrichment
CC GO:0009536 plastid IEP Enrichment
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Enrichment
BP GO:0015994 chlorophyll metabolic process IEP Enrichment
BP GO:0015995 chlorophyll biosynthetic process IEP Enrichment
BP GO:0017038 protein import IEP Enrichment
BP GO:0019725 cellular homeostasis IEP Enrichment
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0042440 pigment metabolic process IEP Enrichment
BP GO:0045454 cell redox homeostasis IEP Enrichment
BP GO:0046148 pigment biosynthetic process IEP Enrichment
BP GO:0046168 glycerol-3-phosphate catabolic process IEP Enrichment
MF GO:0046406 magnesium protoporphyrin IX methyltransferase activity IEP Enrichment
MF GO:0046422 violaxanthin de-epoxidase activity IEP Enrichment
MF GO:0047952 glycerol-3-phosphate dehydrogenase [NAD(P)+] activity IEP Enrichment
BP GO:0052646 alditol phosphate metabolic process IEP Enrichment
BP GO:1901136 carbohydrate derivative catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR002314 aa-tRNA-synt_IIb 377 589
IPR012947 tRNA_SAD 219 276
IPR004154 Anticodon-bd 601 688
No external refs found!