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  5. XM_003057988.1

XM_003057988.1 (MicpuC2_57097, 57097)


Aliases : MicpuC2_57097, 57097

Description : Sel1-like repeat; Zinc finger, MYND-type [Interproscan].


Gene families : OG_01_0001732 (OrthoFinder) Phylogenetic Tree(s): OG0001732_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003057988.1
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
XM_003057282.1 MicpuC2_56386, 56386 Sel1-like repeat [Interproscan]. 0.02 OrthoFinder
XM_003060177.1 MicpuC2_47792, 47792 Sel1-like repeat [Interproscan]. 0.01 OrthoFinder
XM_003062662.1 MicpuC2_52364, 52364 Sel1-like repeat; Zinc finger, MYND-type [Interproscan]. 0.02 OrthoFinder
XM_003062692.1 MicpuC2_21357, 21357 Sel1-like repeat [Interproscan]. 0.02 OrthoFinder
XM_003063991.1 MicpuC2_53987, 53987 Sel1-like repeat [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
InterPro domains Description Start Stop
IPR006597 Sel1-like 23 58
IPR006597 Sel1-like 297 331
IPR006597 Sel1-like 565 587
IPR006597 Sel1-like 78 90
IPR006597 Sel1-like 91 129
IPR006597 Sel1-like 364 399
IPR006597 Sel1-like 406 432
IPR006597 Sel1-like 164 198
IPR006597 Sel1-like 445 475
IPR006597 Sel1-like 230 265
IPR006597 Sel1-like 148 162
IPR006597 Sel1-like 333 363
IPR002893 Znf_MYND 616 660
No external refs found!