1. Home
  2. Species
  3. Micromonas pusilla
  4. Sequence
  5. XM_003057748.1

XM_003057748.1 (MicpuC2_44200, 44200)


Aliases : MicpuC2_44200, 44200

Description : ATP-binding cassette superfamily


Gene families : OG_01_0000132 (OrthoFinder) Phylogenetic Tree(s): OG0000132_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003057748.1
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020629.98 tig00020629_g12419.t1 ABC transporter F family member 3 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cre01.g034950 30788752 ABC transporter F family member 4 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cre11.g467781 30775790 ABC transporter F family member 1 OS=Arabidopsis thaliana 0.04 OrthoFinder
Cre11.g478128 30775784 ABC transporter F family member 3 OS=Arabidopsis thaliana 0.02 OrthoFinder
Dusal.0100s00016.1 33202465 ABC transporter-like [Interproscan]. 0.02 OrthoFinder
Dusal.0335s00016.1 33196473 ABC transporter-like; ABC-transporter extension domain... 0.05 OrthoFinder
PTI_01G02750.1 No alias ABC transporter-like; ABC-transporter extension domain... 0.02 OrthoFinder
PTI_17G00290.1 No alias ABC transporter-like; ABC-transporter extension domain... 0.02 OrthoFinder
Sro1254_g256400.2 No alias ABC transporter-like [Interproscan]. 0.02 OrthoFinder
Sro2585_g331900.1 Contig1533.g13925 Tylosin resistance ATP-binding protein TlrC 0.02 OrthoFinder
Sro419_g139050.1 Contig4415.g33166 Tylosin resistance ATP-binding protein TlrC 0.02 OrthoFinder
Vocar.0001s0777.1 32886021 ABC transporter-like [Interproscan]. 0.03 OrthoFinder
Vocar.0027s0024.1 32887256 ABC-transporter extension domain; ABC transporter-like... 0.02 OrthoFinder
XM_002500098.1 MICPUN_55988, 55988 ATP-binding cassette superfamily 0.02 OrthoFinder
XM_002503388.1 MICPUN_83355, 83355 ATP-binding cassette superfamily 0.02 OrthoFinder
lcl|BLLF01000797.1_cds_GFH15031.1_9508 HaLaN_11185, GFH15031 Hypothetical protein 0.02 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61109.1_452 PRW61109 ATP-binding cassette 0.03 OrthoFinder
lcl|LHPG02000008.1_cds_PRW56522.1_9654 PRW56522 ABC transporter F family member 4 isoform A 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004674 protein serine/threonine kinase activity IEP Enrichment
MF GO:0004843 thiol-dependent deubiquitinase IEP Enrichment
MF GO:0005096 GTPase activator activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005777 peroxisome IEP Enrichment
MF GO:0008047 enzyme activator activity IEP Enrichment
MF GO:0008242 omega peptidase activity IEP Enrichment
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Enrichment
CC GO:0030684 preribosome IEP Enrichment
MF GO:0030695 GTPase regulator activity IEP Enrichment
CC GO:0032040 small-subunit processome IEP Enrichment
CC GO:0042579 microbody IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Enrichment
MF GO:0101005 deubiquitinase activity IEP Enrichment
MF GO:1990380 Lys48-specific deubiquitinase activity IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 325 458
IPR032781 ABC_tran_Xtn 207 281
IPR003439 ABC_transporter-like_ATP-bd 11 167
No external refs found!