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  5. XM_003057741.1

XM_003057741.1 (MicpuC2_47070, 47070)


Aliases : MicpuC2_47070, 47070

Description : CCR4-Not complex, Not1 subunit, domain of unknown function DUF3819; CCR4-NOT transcription complex subunit 1, TTP binding domain; CCR4-Not complex component, Not1, C-terminal; CCR4-NOT transcription complex subunit 1, CAF1-binding domain; CCR4-NOT transcription complex subunit 1, HEAT repeat [Interproscan].


Gene families : OG_01_0002549 (OrthoFinder) Phylogenetic Tree(s): OG0002549_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003057741.1
Cluster HCCA: Cluster_89

Target Alias Description ECC score Gene Family Method Actions
Cre14.g632950 30776512, NOT1 RNA processing.RNA decay.deadenylation-dependent... 0.02 OrthoFinder
EOD13355 No alias CCR4-NOT transcription complex subunit 1, HEAT repeat;... 0.02 OrthoFinder
Transcript_contig_54481 54481 CCR4-NOT transcription complex subunit 1, TTP binding... 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003747 translation release factor activity IEP Enrichment
MF GO:0003887 DNA-directed DNA polymerase activity IEP Enrichment
MF GO:0005047 signal recognition particle binding IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0005543 phospholipid binding IEP Enrichment
CC GO:0005785 signal recognition particle receptor complex IEP Enrichment
BP GO:0006415 translational termination IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
MF GO:0008079 translation termination factor activity IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
MF GO:0008483 transaminase activity IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
MF GO:0015291 secondary active transmembrane transporter activity IEP Enrichment
MF GO:0015297 antiporter activity IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Enrichment
BP GO:0022411 cellular component disassembly IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
CC GO:0030118 clathrin coat IEP Enrichment
CC GO:0030120 vesicle coat IEP Enrichment
CC GO:0030125 clathrin vesicle coat IEP Enrichment
CC GO:0030126 COPI vesicle coat IEP Enrichment
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Enrichment
CC GO:0030132 clathrin coat of coated pit IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
BP GO:0032984 protein-containing complex disassembly IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
MF GO:0034061 DNA polymerase activity IEP Enrichment
MF GO:0043021 ribonucleoprotein complex binding IEP Enrichment
BP GO:0043624 cellular protein complex disassembly IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
CC GO:0098797 plasma membrane protein complex IEP Enrichment
InterPro domains Description Start Stop
IPR032194 CNOT1_HEAT 393 539
IPR007196 CCR4-Not_Not1_C 1852 2211
IPR032191 CNOT1_CAF1_bind 886 1105
IPR032193 CNOT1_TTP_bind 609 764
IPR024557 CCR4-Not_Not1su_DUF3819 1198 1342
No external refs found!