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  5. XM_003057578.1

XM_003057578.1 (MicpuC2_67120, 67120)


Aliases : MicpuC2_67120, 67120

Description : Snf7 family [Interproscan].


Gene families : OG_01_0002541 (OrthoFinder) Phylogenetic Tree(s): OG0002541_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003057578.1
Cluster HCCA: Cluster_80

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021432.8 tig00021432_g21199.t1 Vesicle trafficking.endomembrane trafficking.ESCRT... 0.02 OrthoFinder
Cre13.g577950 30784116, VPS60 Vesicle trafficking.endomembrane trafficking.ESCRT... 0.02 OrthoFinder
OT_04G02540.1 No alias Snf7 family [Interproscan]. 0.02 OrthoFinder
XM_002501866.1 MICPUN_112661, 112661 Snf7 family [Interproscan]. 0.04 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0007034 vacuolar transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Enrichment
MF GO:0005484 SNAP receptor activity IEP Enrichment
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Enrichment
BP GO:0006479 protein methylation IEP Enrichment
BP GO:0006480 N-terminal protein amino acid methylation IEP Enrichment
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP Enrichment
BP GO:0007154 cell communication IEP Enrichment
BP GO:0008213 protein alkylation IEP Enrichment
MF GO:0008289 lipid binding IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
CC GO:0016592 mediator complex IEP Enrichment
MF GO:0030674 protein-macromolecule adaptor activity IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
BP GO:0031365 N-terminal protein amino acid modification IEP Enrichment
BP GO:0043414 macromolecule methylation IEP Enrichment
MF GO:0060090 molecular adaptor activity IEP Enrichment
InterPro domains Description Start Stop
IPR005024 Snf7_fam 13 206
No external refs found!