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  5. XM_003057348.1

XM_003057348.1 (MicpuC2_46787, 46787)


Aliases : MicpuC2_46787, 46787

Description : SET domain; Rubisco LSMT, substrate-binding domain [Interproscan].


Gene families : OG_01_0001043 (OrthoFinder) Phylogenetic Tree(s): OG0001043_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003057348.1
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
Sro1082_g239190.1 Contig1844.g16164 Rubisco LSMT, substrate-binding domain [Interproscan]. 0.01 OrthoFinder
Transcript_contig_68922 68922 Hypothetical protein 0.01 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499615.1_8568 KAA8499615 Hypothetical protein 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEP Enrichment
MF GO:0003747 translation release factor activity IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
MF GO:0004559 alpha-mannosidase activity IEP Enrichment
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Enrichment
CC GO:0005685 U1 snRNP IEP Enrichment
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Enrichment
BP GO:0006376 mRNA splice site selection IEP Enrichment
BP GO:0006415 translational termination IEP Enrichment
MF GO:0008079 translation termination factor activity IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
MF GO:0008171 O-methyltransferase activity IEP Enrichment
CC GO:0008303 caspase complex IEP Enrichment
BP GO:0009092 homoserine metabolic process IEP Enrichment
BP GO:0009890 negative regulation of biosynthetic process IEP Enrichment
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Enrichment
MF GO:0015923 mannosidase activity IEP Enrichment
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Enrichment
CC GO:0016592 mediator complex IEP Enrichment
MF GO:0017056 structural constituent of nuclear pore IEP Enrichment
BP GO:0019346 transsulfuration IEP Enrichment
BP GO:0022411 cellular component disassembly IEP Enrichment
BP GO:0022618 ribonucleoprotein complex assembly IEP Enrichment
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Enrichment
BP GO:0031324 negative regulation of cellular metabolic process IEP Enrichment
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Enrichment
BP GO:0032984 protein-containing complex disassembly IEP Enrichment
CC GO:0042765 GPI-anchor transamidase complex IEP Enrichment
BP GO:0043624 cellular protein complex disassembly IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
BP GO:0045892 negative regulation of transcription, DNA-templated IEP Enrichment
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0050667 homocysteine metabolic process IEP Enrichment
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051253 negative regulation of RNA metabolic process IEP Enrichment
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Enrichment
CC GO:0097525 spliceosomal snRNP complex IEP Enrichment
CC GO:0120114 Sm-like protein family complex IEP Enrichment
BP GO:1902679 negative regulation of RNA biosynthetic process IEP Enrichment
BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP Enrichment
CC GO:1905369 endopeptidase complex IEP Enrichment
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR001214 SET_dom 88 347
IPR015353 Rubisco_LSMT_subst-bd 414 508
No external refs found!