XM_003056970.1 (MicpuC2_15197, 15197)


Aliases : MicpuC2_15197, 15197

Description : tRNA-binding domain [Interproscan].


Gene families : OG_01_0000567 (OrthoFinder) Phylogenetic Tree(s): OG0000567_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003056970.1
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
Cre01.g046652 30789622 Protein biosynthesis.aminoacyl-tRNA synthetase... 0.06 OrthoFinder
Cz06g04060.t1 No alias tRNA-binding domain [Interproscan]. 0.06 OrthoFinder
Dusal.0398s00003.1 33187706 tRNA-binding domain [Interproscan]. 0.02 OrthoFinder
Vocar.0020s0058.1 32886652 Glu-tRNAGln amidotransferase C subunit; tRNA-binding... 0.02 OrthoFinder
XM_002502371.1 MICPUN_82300, 82300 tRNA-binding domain [Interproscan]. 0.07 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004618 phosphoglycerate kinase activity IEP Enrichment
MF GO:0004635 phosphoribosyl-AMP cyclohydrolase activity IEP Enrichment
MF GO:0004751 ribose-5-phosphate isomerase activity IEP Enrichment
MF GO:0004807 triose-phosphate isomerase activity IEP Enrichment
MF GO:0005507 copper ion binding IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0006091 generation of precursor metabolites and energy IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
CC GO:0009512 cytochrome b6f complex IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009522 photosystem I IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
CC GO:0009538 photosystem I reaction center IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Enrichment
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Enrichment
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016854 racemase and epimerase activity IEP Enrichment
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Enrichment
MF GO:0016860 intramolecular oxidoreductase activity IEP Enrichment
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Enrichment
BP GO:0017004 cytochrome complex assembly IEP Enrichment
MF GO:0019238 cyclohydrolase activity IEP Enrichment
CC GO:0019898 extrinsic component of membrane IEP Enrichment
MF GO:0030145 manganese ion binding IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
CC GO:0034357 photosynthetic membrane IEP Enrichment
CC GO:0042651 thylakoid membrane IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
MF GO:0045158 electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0051920 peroxiredoxin activity IEP Enrichment
CC GO:0070069 cytochrome complex IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
InterPro domains Description Start Stop
IPR002547 tRNA-bd_dom 18 112
No external refs found!