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  5. XM_003056893.1

XM_003056893.1 (MicpuC2_56551, 56551)


Aliases : MicpuC2_56551, 56551

Description : Sel1-like repeat [Interproscan].


Gene families : OG_01_0001251 (OrthoFinder) Phylogenetic Tree(s): OG0001251_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003056893.1
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
XM_003055022.1 MicpuC2_50438, 50438 Sel1-like repeat [Interproscan]. 0.06 OrthoFinder
XM_003055023.1 MicpuC2_50439, 50439 Sel1-like repeat [Interproscan]. 0.05 OrthoFinder
XM_003055096.1 MicpuC2_50593, 50593 Sel1-like repeat [Interproscan]. 0.05 OrthoFinder
XM_003055565.1 MicpuC2_50447, 50447 Sel1-like repeat [Interproscan]. 0.05 OrthoFinder
XM_003062186.1 MicpuC2_51856, 51856 Sel1-like repeat [Interproscan]. 0.03 OrthoFinder
XM_003062730.1 MicpuC2_52526, 52526 Sel1-like repeat [Interproscan]. 0.06 OrthoFinder
XM_003062840.1 MicpuC2_42528, 42528 Sel1-like repeat [Interproscan]. 0.05 OrthoFinder
XM_003062875.1 MicpuC2_52827, 52827 Sel1-like repeat [Interproscan]. 0.07 OrthoFinder
XM_003062932.1 MicpuC2_6517, 6517 Sel1-like repeat [Interproscan]. 0.07 OrthoFinder
XM_003062936.1 MicpuC2_42397, 42397 Sel1-like repeat [Interproscan]. 0.06 OrthoFinder
XM_003063112.1 MicpuC2_52918, 52918 Sel1-like repeat [Interproscan]. 0.05 OrthoFinder
XM_003063945.1 MicpuC2_53884, 53884 Sel1-like repeat [Interproscan]. 0.06 OrthoFinder
XM_003064437.1 MicpuC2_54194, 54194 Sel1-like repeat [Interproscan]. 0.07 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Enrichment
MF GO:0005507 copper ion binding IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006298 mismatch repair IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
BP GO:0007275 multicellular organism development IEP Enrichment
BP GO:0009187 cyclic nucleotide metabolic process IEP Enrichment
BP GO:0009190 cyclic nucleotide biosynthetic process IEP Enrichment
MF GO:0030983 mismatched DNA binding IEP Enrichment
BP GO:0032501 multicellular organismal process IEP Enrichment
BP GO:0032502 developmental process IEP Enrichment
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
BP GO:0048856 anatomical structure development IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
InterPro domains Description Start Stop
IPR006597 Sel1-like 81 115
IPR006597 Sel1-like 62 79
No external refs found!