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Aliases : MicpuC2_44063, 44063
Description : 26S proteasome regulatory subunit Rpn7/COP9 signalosome complex subunit 1; Proteasome component (PCI) domain [Interproscan].
Gene families : OG_01_0003515 (OrthoFinder) Phylogenetic Tree(s): OG0003515_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: XM_003056762.1 | |
| Cluster | HCCA: Cluster_100 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00000615.75 | tig00000615_g2605.t1 | Protein degradation.26S proteasome.regulatory... | 0.06 | OrthoFinder | |
| Cre13.g581450 | 30784003, RPN7 | Protein degradation.26S proteasome.regulatory... | 0.07 | OrthoFinder | |
| Cz08g26110.t1 | No alias | 26S proteasome regulatory subunit Rpn7/COP9 signalosome... | 0.04 | OrthoFinder | |
| EOD23564 | No alias | 26S proteasome regulatory subunit Rpn7/COP9 signalosome... | 0.04 | OrthoFinder | |
| EOD33243 | No alias | 26S proteasome regulatory subunit Rpn7/COP9 signalosome... | 0.02 | OrthoFinder | |
| OT_09G02120.1 | No alias | Proteasome component (PCI) domain; 26S proteasome... | 0.04 | OrthoFinder | |
| PTI_02G06010.1 | No alias | 26S proteasome regulatory subunit Rpn7/COP9 signalosome... | 0.05 | OrthoFinder | |
| Sro2134_g315960.1 | Contig2353.g19341 | ATPase regulatory subunit 6 | 0.11 | OrthoFinder | |
| TP05G01650.1 | No alias | Proteasome component (PCI) domain; 26S proteasome... | 0.06 | OrthoFinder | |
| Transcript_contig_89237 | 89237 | Proteasome component (PCI) domain; 26S proteasome... | 0.03 | OrthoFinder | |
| XM_002508764.1 | MICPUN_109050, 109050 | Proteasome component (PCI) domain; 26S proteasome... | 0.07 | OrthoFinder | |
| lcl|BLLF01001077.1_cds_GFH16965.1_11442 | HaLaN_13491, GFH16965 | PCI domain-containing protein | 0.04 | OrthoFinder | |
| lcl|LHPG02000002.1_cds_PRW60726.1_4407 | PRW60726 | 26S proteasome non-ATPase regulatory subunit 6-like protein | 0.02 | OrthoFinder | |
| lcl|VRMN01000002.1_cds_KAA8496364.1_93 | KAA8496364 | 26S proteasome non-ATPase regulatory subunit 6-like | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000123 | histone acetyltransferase complex | IEP | Enrichment |
| CC | GO:0000124 | SAGA complex | IEP | Enrichment |
| CC | GO:0000151 | ubiquitin ligase complex | IEP | Enrichment |
| CC | GO:0000152 | nuclear ubiquitin ligase complex | IEP | Enrichment |
| MF | GO:0000166 | nucleotide binding | IEP | Enrichment |
| MF | GO:0000774 | adenyl-nucleotide exchange factor activity | IEP | Enrichment |
| MF | GO:0001671 | ATPase activator activity | IEP | Enrichment |
| MF | GO:0003682 | chromatin binding | IEP | Enrichment |
| MF | GO:0003713 | transcription coactivator activity | IEP | Enrichment |
| MF | GO:0003824 | catalytic activity | IEP | Enrichment |
| MF | GO:0004175 | endopeptidase activity | IEP | Enrichment |
| MF | GO:0004298 | threonine-type endopeptidase activity | IEP | Enrichment |
| MF | GO:0004602 | glutathione peroxidase activity | IEP | Enrichment |
| CC | GO:0005575 | cellular_component | IEP | Enrichment |
| CC | GO:0005643 | nuclear pore | IEP | Enrichment |
| CC | GO:0005680 | anaphase-promoting complex | IEP | Enrichment |
| CC | GO:0005750 | mitochondrial respiratory chain complex III | IEP | Enrichment |
| CC | GO:0005759 | mitochondrial matrix | IEP | Enrichment |
| CC | GO:0005839 | proteasome core complex | IEP | Enrichment |
| BP | GO:0006122 | mitochondrial electron transport, ubiquinol to cytochrome c | IEP | Enrichment |
| BP | GO:0006325 | chromatin organization | IEP | Enrichment |
| BP | GO:0006338 | chromatin remodeling | IEP | Enrichment |
| BP | GO:0006405 | RNA export from nucleus | IEP | Enrichment |
| BP | GO:0006406 | mRNA export from nucleus | IEP | Enrichment |
| BP | GO:0006457 | protein folding | IEP | Enrichment |
| BP | GO:0006464 | cellular protein modification process | IEP | Enrichment |
| BP | GO:0006476 | protein deacetylation | IEP | Enrichment |
| BP | GO:0006508 | proteolysis | IEP | Enrichment |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | Enrichment |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0006913 | nucleocytoplasmic transport | IEP | Enrichment |
| BP | GO:0008150 | biological_process | IEP | Enrichment |
| BP | GO:0008152 | metabolic process | IEP | Enrichment |
| MF | GO:0008233 | peptidase activity | IEP | Enrichment |
| CC | GO:0008541 | proteasome regulatory particle, lid subcomplex | IEP | Enrichment |
| BP | GO:0009057 | macromolecule catabolic process | IEP | Enrichment |
| BP | GO:0009060 | aerobic respiration | IEP | Enrichment |
| BP | GO:0009891 | positive regulation of biosynthetic process | IEP | Enrichment |
| BP | GO:0009893 | positive regulation of metabolic process | IEP | Enrichment |
| BP | GO:0009987 | cellular process | IEP | Enrichment |
| BP | GO:0010557 | positive regulation of macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:0010604 | positive regulation of macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0015931 | nucleobase-containing compound transport | IEP | Enrichment |
| BP | GO:0015980 | energy derivation by oxidation of organic compounds | IEP | Enrichment |
| BP | GO:0016043 | cellular component organization | IEP | Enrichment |
| CC | GO:0016272 | prefoldin complex | IEP | Enrichment |
| BP | GO:0016569 | covalent chromatin modification | IEP | Enrichment |
| BP | GO:0016570 | histone modification | IEP | Enrichment |
| BP | GO:0016573 | histone acetylation | IEP | Enrichment |
| BP | GO:0016575 | histone deacetylation | IEP | Enrichment |
| MF | GO:0016787 | hydrolase activity | IEP | Enrichment |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Enrichment |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | Enrichment |
| MF | GO:0017076 | purine nucleotide binding | IEP | Enrichment |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | Enrichment |
| BP | GO:0019538 | protein metabolic process | IEP | Enrichment |
| BP | GO:0019646 | aerobic electron transport chain | IEP | Enrichment |
| CC | GO:0019773 | proteasome core complex, alpha-subunit complex | IEP | Enrichment |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | Enrichment |
| BP | GO:0022900 | electron transport chain | IEP | Enrichment |
| BP | GO:0022904 | respiratory electron transport chain | IEP | Enrichment |
| MF | GO:0030234 | enzyme regulator activity | IEP | Enrichment |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Enrichment |
| CC | GO:0031248 | protein acetyltransferase complex | IEP | Enrichment |
| BP | GO:0031325 | positive regulation of cellular metabolic process | IEP | Enrichment |
| BP | GO:0031328 | positive regulation of cellular biosynthetic process | IEP | Enrichment |
| CC | GO:0031461 | cullin-RING ubiquitin ligase complex | IEP | Enrichment |
| MF | GO:0031491 | nucleosome binding | IEP | Enrichment |
| CC | GO:0031974 | membrane-enclosed lumen | IEP | Enrichment |
| MF | GO:0032553 | ribonucleotide binding | IEP | Enrichment |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Enrichment |
| CC | GO:0032991 | protein-containing complex | IEP | Enrichment |
| BP | GO:0035601 | protein deacylation | IEP | Enrichment |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Enrichment |
| MF | GO:0036094 | small molecule binding | IEP | Enrichment |
| BP | GO:0036211 | protein modification process | IEP | Enrichment |
| MF | GO:0042802 | identical protein binding | IEP | Enrichment |
| MF | GO:0042803 | protein homodimerization activity | IEP | Enrichment |
| BP | GO:0043044 | ATP-dependent chromatin remodeling | IEP | Enrichment |
| MF | GO:0043168 | anion binding | IEP | Enrichment |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Enrichment |
| CC | GO:0043233 | organelle lumen | IEP | Enrichment |
| BP | GO:0043248 | proteasome assembly | IEP | Enrichment |
| BP | GO:0043412 | macromolecule modification | IEP | Enrichment |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | Enrichment |
| BP | GO:0044238 | primary metabolic process | IEP | Enrichment |
| BP | GO:0044248 | cellular catabolic process | IEP | Enrichment |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | Enrichment |
| BP | GO:0044267 | cellular protein metabolic process | IEP | Enrichment |
| CC | GO:0045275 | respiratory chain complex III | IEP | Enrichment |
| BP | GO:0045333 | cellular respiration | IEP | Enrichment |
| BP | GO:0045893 | positive regulation of transcription, DNA-templated | IEP | Enrichment |
| BP | GO:0045935 | positive regulation of nucleobase-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0048518 | positive regulation of biological process | IEP | Enrichment |
| BP | GO:0048522 | positive regulation of cellular process | IEP | Enrichment |
| BP | GO:0050657 | nucleic acid transport | IEP | Enrichment |
| BP | GO:0050658 | RNA transport | IEP | Enrichment |
| BP | GO:0051028 | mRNA transport | IEP | Enrichment |
| MF | GO:0051087 | chaperone binding | IEP | Enrichment |
| BP | GO:0051168 | nuclear export | IEP | Enrichment |
| BP | GO:0051169 | nuclear transport | IEP | Enrichment |
| BP | GO:0051173 | positive regulation of nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0051236 | establishment of RNA localization | IEP | Enrichment |
| BP | GO:0051254 | positive regulation of RNA metabolic process | IEP | Enrichment |
| BP | GO:0051603 | proteolysis involved in cellular protein catabolic process | IEP | Enrichment |
| MF | GO:0060589 | nucleoside-triphosphatase regulator activity | IEP | Enrichment |
| MF | GO:0060590 | ATPase regulator activity | IEP | Enrichment |
| MF | GO:0070003 | threonine-type peptidase activity | IEP | Enrichment |
| CC | GO:0070013 | intracellular organelle lumen | IEP | Enrichment |
| CC | GO:0070069 | cytochrome complex | IEP | Enrichment |
| CC | GO:0070461 | SAGA-type complex | IEP | Enrichment |
| BP | GO:0071704 | organic substance metabolic process | IEP | Enrichment |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | Enrichment |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Enrichment |
| BP | GO:0098732 | macromolecule deacylation | IEP | Enrichment |
| MF | GO:0098772 | molecular function regulator | IEP | Enrichment |
| CC | GO:0098803 | respiratory chain complex | IEP | Enrichment |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Enrichment |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | Enrichment |
| CC | GO:0140535 | intracellular protein-containing complex | IEP | Enrichment |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Enrichment |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Enrichment |
| CC | GO:1902493 | acetyltransferase complex | IEP | Enrichment |
| CC | GO:1902494 | catalytic complex | IEP | Enrichment |
| BP | GO:1902680 | positive regulation of RNA biosynthetic process | IEP | Enrichment |
| BP | GO:1903508 | positive regulation of nucleic acid-templated transcription | IEP | Enrichment |
| CC | GO:1990234 | transferase complex | IEP | Enrichment |
| No external refs found! |