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Aliases : MicpuC2_32266, 32266
Description : 26S proteasome non-ATPase regulatory subunit RPN1, C-terminal; RPN1/RPN2, N-terminal [Interproscan].
Gene families : OG_01_0002845 (OrthoFinder) Phylogenetic Tree(s): OG0002845_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: XM_003056753.1 | |
| Cluster | HCCA: Cluster_16 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00020703.10 | tig00020703_g13111.t1 | Protein degradation.26S proteasome.regulatory... | 0.03 | OrthoFinder | |
| Cre16.g676197 | 30777418, RPN1 | Protein degradation.26S proteasome.regulatory... | 0.05 | OrthoFinder | |
| Cz12g21080.t1 | No alias | 26S proteasome non-ATPase regulatory subunit RPN1,... | 0.02 | OrthoFinder | |
| Dusal.0089s00028.1 | 33198315 | Proteasome/cyclosome repeat; RPN1/RPN2, N-terminal... | 0.03 | OrthoFinder | |
| EOD19524 | No alias | 26S proteasome non-ATPase regulatory subunit RPN1,... | 0.03 | OrthoFinder | |
| EOD21217 | No alias | 26S proteasome non-ATPase regulatory subunit RPN1,... | 0.03 | OrthoFinder | |
| OT_09G01040.1 | No alias | 26S proteasome non-ATPase regulatory subunit RPN1,... | 0.03 | OrthoFinder | |
| PTI_12G01960.1 | No alias | 26S proteasome non-ATPase regulatory subunit RPN1,... | 0.08 | OrthoFinder | |
| Sro142_g066400.1 | Contig226.g2689 | ATPase regulatory subunit 2 | 0.09 | OrthoFinder | |
| TP05G01900.1 | No alias | RPN1/RPN2, N-terminal; 26S proteasome non-ATPase... | 0.07 | OrthoFinder | |
| XM_002500577.1 | MICPUN_90309, 90309 | 26S proteasome non-ATPase regulatory subunit RPN1,... | 0.02 | OrthoFinder | |
| lcl|LHPG02000016.1_cds_PRW33713.1_3354 | PRW33713 | 26S proteasome regulatory subunit | 0.03 | OrthoFinder | |
| lcl|VRMN01000012.1_cds_KAA8491649.1_5117 | KAA8491649 | 26S proteasome regulatory subunit RPN1 | 0.04 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000123 | histone acetyltransferase complex | IEP | Enrichment |
| CC | GO:0000124 | SAGA complex | IEP | Enrichment |
| CC | GO:0000151 | ubiquitin ligase complex | IEP | Enrichment |
| CC | GO:0000152 | nuclear ubiquitin ligase complex | IEP | Enrichment |
| MF | GO:0000166 | nucleotide binding | IEP | Enrichment |
| MF | GO:0001671 | ATPase activator activity | IEP | Enrichment |
| MF | GO:0003674 | molecular_function | IEP | Enrichment |
| MF | GO:0003682 | chromatin binding | IEP | Enrichment |
| MF | GO:0003713 | transcription coactivator activity | IEP | Enrichment |
| MF | GO:0003824 | catalytic activity | IEP | Enrichment |
| MF | GO:0003924 | GTPase activity | IEP | Enrichment |
| MF | GO:0004175 | endopeptidase activity | IEP | Enrichment |
| MF | GO:0004298 | threonine-type endopeptidase activity | IEP | Enrichment |
| MF | GO:0004645 | 1,4-alpha-oligoglucan phosphorylase activity | IEP | Enrichment |
| MF | GO:0004784 | superoxide dismutase activity | IEP | Enrichment |
| MF | GO:0005488 | binding | IEP | Enrichment |
| MF | GO:0005524 | ATP binding | IEP | Enrichment |
| MF | GO:0005525 | GTP binding | IEP | Enrichment |
| CC | GO:0005575 | cellular_component | IEP | Enrichment |
| CC | GO:0005643 | nuclear pore | IEP | Enrichment |
| CC | GO:0005680 | anaphase-promoting complex | IEP | Enrichment |
| CC | GO:0005787 | signal peptidase complex | IEP | Enrichment |
| CC | GO:0005839 | proteasome core complex | IEP | Enrichment |
| BP | GO:0006338 | chromatin remodeling | IEP | Enrichment |
| BP | GO:0006366 | transcription by RNA polymerase II | IEP | Enrichment |
| BP | GO:0006405 | RNA export from nucleus | IEP | Enrichment |
| BP | GO:0006406 | mRNA export from nucleus | IEP | Enrichment |
| BP | GO:0006465 | signal peptide processing | IEP | Enrichment |
| BP | GO:0006508 | proteolysis | IEP | Enrichment |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | Enrichment |
| BP | GO:0006801 | superoxide metabolic process | IEP | Enrichment |
| BP | GO:0006913 | nucleocytoplasmic transport | IEP | Enrichment |
| BP | GO:0008150 | biological_process | IEP | Enrichment |
| BP | GO:0008152 | metabolic process | IEP | Enrichment |
| MF | GO:0008184 | glycogen phosphorylase activity | IEP | Enrichment |
| MF | GO:0008233 | peptidase activity | IEP | Enrichment |
| CC | GO:0008541 | proteasome regulatory particle, lid subcomplex | IEP | Enrichment |
| BP | GO:0009057 | macromolecule catabolic process | IEP | Enrichment |
| BP | GO:0009891 | positive regulation of biosynthetic process | IEP | Enrichment |
| BP | GO:0009893 | positive regulation of metabolic process | IEP | Enrichment |
| BP | GO:0010557 | positive regulation of macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:0010604 | positive regulation of macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0015931 | nucleobase-containing compound transport | IEP | Enrichment |
| CC | GO:0016272 | prefoldin complex | IEP | Enrichment |
| MF | GO:0016721 | oxidoreductase activity, acting on superoxide radicals as acceptor | IEP | Enrichment |
| MF | GO:0016787 | hydrolase activity | IEP | Enrichment |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Enrichment |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | Enrichment |
| MF | GO:0017076 | purine nucleotide binding | IEP | Enrichment |
| MF | GO:0017111 | nucleoside-triphosphatase activity | IEP | Enrichment |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | Enrichment |
| BP | GO:0019538 | protein metabolic process | IEP | Enrichment |
| CC | GO:0019773 | proteasome core complex, alpha-subunit complex | IEP | Enrichment |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | Enrichment |
| MF | GO:0030145 | manganese ion binding | IEP | Enrichment |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Enrichment |
| MF | GO:0031072 | heat shock protein binding | IEP | Enrichment |
| CC | GO:0031248 | protein acetyltransferase complex | IEP | Enrichment |
| BP | GO:0031325 | positive regulation of cellular metabolic process | IEP | Enrichment |
| BP | GO:0031328 | positive regulation of cellular biosynthetic process | IEP | Enrichment |
| CC | GO:0031461 | cullin-RING ubiquitin ligase complex | IEP | Enrichment |
| MF | GO:0031491 | nucleosome binding | IEP | Enrichment |
| MF | GO:0032553 | ribonucleotide binding | IEP | Enrichment |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Enrichment |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Enrichment |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Enrichment |
| CC | GO:0032991 | protein-containing complex | IEP | Enrichment |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Enrichment |
| MF | GO:0036094 | small molecule binding | IEP | Enrichment |
| BP | GO:0043044 | ATP-dependent chromatin remodeling | IEP | Enrichment |
| MF | GO:0043167 | ion binding | IEP | Enrichment |
| MF | GO:0043168 | anion binding | IEP | Enrichment |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0043248 | proteasome assembly | IEP | Enrichment |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | Enrichment |
| BP | GO:0044248 | cellular catabolic process | IEP | Enrichment |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | Enrichment |
| BP | GO:0045893 | positive regulation of transcription, DNA-templated | IEP | Enrichment |
| BP | GO:0045935 | positive regulation of nucleobase-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0048518 | positive regulation of biological process | IEP | Enrichment |
| BP | GO:0048522 | positive regulation of cellular process | IEP | Enrichment |
| BP | GO:0050657 | nucleic acid transport | IEP | Enrichment |
| BP | GO:0050658 | RNA transport | IEP | Enrichment |
| BP | GO:0051028 | mRNA transport | IEP | Enrichment |
| MF | GO:0051082 | unfolded protein binding | IEP | Enrichment |
| MF | GO:0051087 | chaperone binding | IEP | Enrichment |
| BP | GO:0051168 | nuclear export | IEP | Enrichment |
| BP | GO:0051169 | nuclear transport | IEP | Enrichment |
| BP | GO:0051173 | positive regulation of nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0051236 | establishment of RNA localization | IEP | Enrichment |
| BP | GO:0051254 | positive regulation of RNA metabolic process | IEP | Enrichment |
| BP | GO:0051603 | proteolysis involved in cellular protein catabolic process | IEP | Enrichment |
| MF | GO:0070003 | threonine-type peptidase activity | IEP | Enrichment |
| CC | GO:0070461 | SAGA-type complex | IEP | Enrichment |
| BP | GO:0072593 | reactive oxygen species metabolic process | IEP | Enrichment |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Enrichment |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Enrichment |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | Enrichment |
| CC | GO:0140535 | intracellular protein-containing complex | IEP | Enrichment |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Enrichment |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Enrichment |
| CC | GO:1902493 | acetyltransferase complex | IEP | Enrichment |
| CC | GO:1902494 | catalytic complex | IEP | Enrichment |
| BP | GO:1902680 | positive regulation of RNA biosynthetic process | IEP | Enrichment |
| BP | GO:1903508 | positive regulation of nucleic acid-templated transcription | IEP | Enrichment |
| CC | GO:1905368 | peptidase complex | IEP | Enrichment |
| CC | GO:1990234 | transferase complex | IEP | Enrichment |
| No external refs found! |