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  5. XM_003056709.1

XM_003056709.1 (MicpuC2_45348, 45348)


Aliases : MicpuC2_45348, 45348

Description : Tab2-like [Interproscan].


Gene families : OG_01_0002858 (OrthoFinder) Phylogenetic Tree(s): OG0002858_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003056709.1
Cluster HCCA: Cluster_89

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000622.21 tig00000622_g2634.t1 Protein TAB2 homolog, chloroplastic OS=Zea mays 0.02 OrthoFinder
Cre17.g702500 30782205, TAB2 Protein TAB2 homolog, chloroplastic OS=Arabidopsis thaliana 0.04 OrthoFinder
Cz09g03050.t1 No alias Tab2-like [Interproscan]. 0.02 OrthoFinder
Dusal.0078s00021.1 33203799 Tab2-like [Interproscan]. 0.01 OrthoFinder
EOD39107 No alias Tab2-like [Interproscan]. 0.02 OrthoFinder
Sro321_g116800.1 Contig56.g436 TAB2 homolog, chloroplastic 0.01 OrthoFinder
TP05G04170.1 No alias Tab2-like [Interproscan]. 0.03 OrthoFinder
Transcript_contig_56728 56728 Tab2-like [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0005047 signal recognition particle binding IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
CC GO:0005785 signal recognition particle receptor complex IEP Enrichment
BP GO:0006612 protein targeting to membrane IEP Enrichment
BP GO:0006613 cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006771 riboflavin metabolic process IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP Enrichment
BP GO:0009231 riboflavin biosynthetic process IEP Enrichment
CC GO:0009507 chloroplast IEP Enrichment
CC GO:0009536 plastid IEP Enrichment
BP GO:0016226 iron-sulfur cluster assembly IEP Enrichment
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016987 sigma factor activity IEP Enrichment
BP GO:0017004 cytochrome complex assembly IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
BP GO:0031163 metallo-sulfur cluster assembly IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0042726 flavin-containing compound metabolic process IEP Enrichment
BP GO:0042727 flavin-containing compound biosynthetic process IEP Enrichment
MF GO:0043021 ribonucleoprotein complex binding IEP Enrichment
MF GO:0044877 protein-containing complex binding IEP Enrichment
BP GO:0045047 protein targeting to ER IEP Enrichment
MF GO:0051213 dioxygenase activity IEP Enrichment
BP GO:0051668 localization within membrane IEP Enrichment
BP GO:0070972 protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0072657 protein localization to membrane IEP Enrichment
BP GO:0090150 establishment of protein localization to membrane IEP Enrichment
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP Enrichment
InterPro domains Description Start Stop
IPR009472 Tab2-like 2 263
No external refs found!