XM_003056533.1 (MicpuC2_31931, 31931)

Aliases : MicpuC2_31931, 31931

Description : Arginyl-tRNA synthetase

Gene families : OG_01_0000600 (OrthoFinder) Phylogenetic Tree(s): OG0000600_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: XM_003056533.1
Cluster	HCCA: Cluster_11

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00000042.5	tig00000042_g15392.t1	Secondary metabolism.terpenoids.terpenoid...	0.02	OrthoFinder
Cz04g31040.t1	No alias	DALR anticodon binding; Arginyl-tRNA synthetase,...	0.01	OrthoFinder
Cz04g31060.t1	No alias	Arginyl tRNA synthetase N-terminal domain; Arginyl-tRNA...	0.02	OrthoFinder
PTI_00G03620.1	No alias	Arginyl-tRNA synthetase, catalytic core domain; Arginyl...	0.01	OrthoFinder
lcl\|BLLF01000592.1_cds_GFH13267.1_7744	HaLaN_09114, GFH13267	Putative arginine--tRNA ligase, cytoplasmic	0.01	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004812	aminoacyl-tRNA ligase activity	None	Extended
MF	GO:0004814	arginine-tRNA ligase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	IEA	Interproscan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006399	tRNA metabolic process	None	Extended
BP	GO:0006418	tRNA aminoacylation for protein translation	None	Extended
BP	GO:0006420	arginyl-tRNA aminoacylation	IEA	Interproscan
BP	GO:0006520	cellular amino acid metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
MF	GO:0016874	ligase activity	None	Extended
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0043038	amino acid activation	None	Extended
BP	GO:0043039	tRNA aminoacylation	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140101	catalytic activity, acting on a tRNA	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000428	DNA-directed RNA polymerase complex	IEP	Enrichment
MF	GO:0004356	glutamate-ammonia ligase activity	IEP	Enrichment
MF	GO:0004615	phosphomannomutase activity	IEP	Enrichment
MF	GO:0005525	GTP binding	IEP	Enrichment
CC	GO:0005666	RNA polymerase III complex	IEP	Enrichment
BP	GO:0006351	transcription, DNA-templated	IEP	Enrichment
BP	GO:0006383	transcription by RNA polymerase III	IEP	Enrichment
BP	GO:0009225	nucleotide-sugar metabolic process	IEP	Enrichment
BP	GO:0009226	nucleotide-sugar biosynthetic process	IEP	Enrichment
BP	GO:0009298	GDP-mannose biosynthetic process	IEP	Enrichment
MF	GO:0016211	ammonia ligase activity	IEP	Enrichment
MF	GO:0016868	intramolecular transferase activity, phosphotransferases	IEP	Enrichment
MF	GO:0016880	acid-ammonia (or amide) ligase activity	IEP	Enrichment
MF	GO:0019001	guanyl nucleotide binding	IEP	Enrichment
BP	GO:0019673	GDP-mannose metabolic process	IEP	Enrichment
CC	GO:0030880	RNA polymerase complex	IEP	Enrichment
MF	GO:0032561	guanyl ribonucleotide binding	IEP	Enrichment
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	Enrichment
BP	GO:0045454	cell redox homeostasis	IEP	Enrichment
CC	GO:0055029	nuclear DNA-directed RNA polymerase complex	IEP	Enrichment
CC	GO:0061695	transferase complex, transferring phosphorus-containing groups	IEP	Enrichment
BP	GO:0097659	nucleic acid-templated transcription	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR008909	DALR_anticod-bd	539	653
IPR035684	ArgRS_core	195	525
IPR005148	Arg-tRNA-synth_N	80	164

External Links

No external refs found!

XM_003056533.1 (MicpuC2_31931, 31931)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation