Aliases : MicpuC2_31862, 31862
Description : Ribosomal protein S8 [Interproscan].
Gene families : OG_01_0003009 (OrthoFinder) Phylogenetic Tree(s): OG0003009_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: XM_003056509.1 | |
Cluster | HCCA: Cluster_12 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cpa|evm.model.tig00000158.110 | tig00000158_g10212.t1 | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.06 | OrthoFinder | |
Cre05.g234637 | 30782975 | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.03 | OrthoFinder | |
Cz14g19140.t1 | No alias | Ribosomal protein S8 [Interproscan]. | 0.03 | OrthoFinder | |
EOD40032 | No alias | Ribosomal protein S8 [Ensembl]. | 0.03 | OrthoFinder | |
OT_01G02380.1 | No alias | Ribosomal protein S8 [Interproscan]. | 0.03 | OrthoFinder | |
PTI_26G00870.1 | No alias | Ribosomal protein S8 [Interproscan]. | 0.04 | OrthoFinder | |
Sro60_g034790.1 | Contig797.g8956 | 40S ribosomal protein S15a | 0.06 | OrthoFinder | |
TP10G03670.1 | No alias | Ribosomal protein S8 [Interproscan]. | 0.02 | OrthoFinder | |
Transcript_contig_80036 | 80036 | Ribosomal protein S8 [Interproscan]. | 0.03 | OrthoFinder | |
XM_002507541.1 | MICPUN_107532, 107532 | Ribosomal protein S8 [Interproscan]. | 0.06 | OrthoFinder | |
lcl|LHPG02000004.1_cds_PRW58777.1_7006 | PRW58777 | 40S ribosomal S15a-1 | 0.02 | OrthoFinder | |
lcl|VRMN01000004.1_cds_KAA8495085.1_3615 | KAA8495085 | 40S ribosomal protein S15a | 0.02 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | Enrichment |
CC | GO:0005667 | transcription regulator complex | IEP | Enrichment |
CC | GO:0005672 | transcription factor TFIIA complex | IEP | Enrichment |
BP | GO:0006352 | DNA-templated transcription, initiation | IEP | Enrichment |
BP | GO:0006367 | transcription initiation from RNA polymerase II promoter | IEP | Enrichment |
BP | GO:0018130 | heterocycle biosynthetic process | IEP | Enrichment |
BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Enrichment |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Enrichment |
BP | GO:0032774 | RNA biosynthetic process | IEP | Enrichment |
MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | Enrichment |
BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | Enrichment |
BP | GO:0042254 | ribosome biogenesis | IEP | Enrichment |
BP | GO:0044085 | cellular component biogenesis | IEP | Enrichment |
CC | GO:0090575 | RNA polymerase II transcription regulator complex | IEP | Enrichment |
MF | GO:0097747 | RNA polymerase activity | IEP | Enrichment |
BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000630 | Ribosomal_S8 | 7 | 130 |
No external refs found! |