XM_003056509.1 (MicpuC2_31862, 31862)


Aliases : MicpuC2_31862, 31862

Description : Ribosomal protein S8 [Interproscan].


Gene families : OG_01_0003009 (OrthoFinder) Phylogenetic Tree(s): OG0003009_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003056509.1
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000158.110 tig00000158_g10212.t1 Protein biosynthesis.cytosolic ribosome.small subunit... 0.06 OrthoFinder
Cre05.g234637 30782975 Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder
Cz14g19140.t1 No alias Ribosomal protein S8 [Interproscan]. 0.03 OrthoFinder
EOD40032 No alias Ribosomal protein S8 [Ensembl]. 0.03 OrthoFinder
OT_01G02380.1 No alias Ribosomal protein S8 [Interproscan]. 0.03 OrthoFinder
PTI_26G00870.1 No alias Ribosomal protein S8 [Interproscan]. 0.04 OrthoFinder
Sro60_g034790.1 Contig797.g8956 40S ribosomal protein S15a 0.06 OrthoFinder
TP10G03670.1 No alias Ribosomal protein S8 [Interproscan]. 0.02 OrthoFinder
Transcript_contig_80036 80036 Ribosomal protein S8 [Interproscan]. 0.03 OrthoFinder
XM_002507541.1 MICPUN_107532, 107532 Ribosomal protein S8 [Interproscan]. 0.06 OrthoFinder
lcl|LHPG02000004.1_cds_PRW58777.1_7006 PRW58777 40S ribosomal S15a-1 0.02 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8495085.1_3615 KAA8495085 40S ribosomal protein S15a 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
CC GO:0005667 transcription regulator complex IEP Enrichment
CC GO:0005672 transcription factor TFIIA complex IEP Enrichment
BP GO:0006352 DNA-templated transcription, initiation IEP Enrichment
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
CC GO:0090575 RNA polymerase II transcription regulator complex IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR000630 Ribosomal_S8 7 130
No external refs found!