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  5. XM_003056471.1

XM_003056471.1 (MicpuC2_31782, 31782)


Aliases : MicpuC2_31782, 31782

Description : 60S ribosomal protein L36 (RPL36)


Gene families : OG_01_0003108 (OrthoFinder) Phylogenetic Tree(s): OG0003108_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003056471.1
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021493.69 tig00021493_g21908.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 OrthoFinder
Cre12.g484050 30792099, RPL36 Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder
Cz06g33040.t1 No alias Ribosomal protein L36e [Interproscan]. 0.05 OrthoFinder
Dusal.1916s00002.1 33187807 Ribosomal protein L36e [Interproscan]. 0.02 OrthoFinder
EOD30407 No alias Ribosomal protein L36e [Interproscan]. 0.02 OrthoFinder
OT_02G00860.1 No alias Ribosomal protein L36e [Interproscan]. 0.06 OrthoFinder
PTI_04G00610.1 No alias Ribosomal protein L36e [Interproscan]. 0.04 OrthoFinder
Sro327_g118470.1 Contig839.g9255 60S ribosomal protein L36 0.05 OrthoFinder
SymbC1.scaffold1291.13 1291.13 Ribosomal protein L36e [Interproscan]. 0.02 OrthoFinder
TP04G05720.1 No alias Ribosomal protein L36e [Interproscan]. 0.04 OrthoFinder
Vocar.0031s0112.1 32890137 Ribosomal protein L36e [Interproscan]. 0.02 OrthoFinder
XM_002507094.1 MICPUN_114038, 114038 60S ribosomal protein L36 (RPL36) 0.05 OrthoFinder
lcl|LHPG02000008.1_cds_PRW56617.1_9463 PRW56617 60S ribosomal L36-3-like 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP Enrichment
MF GO:0004620 phospholipase activity IEP Enrichment
MF GO:0004629 phospholipase C activity IEP Enrichment
CC GO:0005667 transcription regulator complex IEP Enrichment
CC GO:0005672 transcription factor TFIIA complex IEP Enrichment
BP GO:0006270 DNA replication initiation IEP Enrichment
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Enrichment
MF GO:0008081 phosphoric diester hydrolase activity IEP Enrichment
MF GO:0016298 lipase activity IEP Enrichment
MF GO:0016597 amino acid binding IEP Enrichment
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
MF GO:0043177 organic acid binding IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
CC GO:0090575 RNA polymerase II transcription regulator complex IEP Enrichment
InterPro domains Description Start Stop
IPR000509 Ribosomal_L36e 2 95
No external refs found!