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  5. XM_003056443.1

XM_003056443.1 (MicpuC2_49461, 49461)


Aliases : MicpuC2_49461, 49461

Description : Glycoside hydrolase family 13 protein (SBEIIA)


Gene families : OG_01_0000579 (OrthoFinder) Phylogenetic Tree(s): OG0000579_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003056443.1
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021432.19 tig00021432_g21211.t1 Carbohydrate metabolism.starch... 0.02 OrthoFinder
Cz09g12180.t1 No alias Glycosyl hydrolase, family 13, catalytic domain;... 0.02 OrthoFinder
OT_03G00880.1 No alias Glycoside hydrolase, family 13, N-terminal; Glycosyl... 0.02 OrthoFinder
Vocar.0013s0009.1 32896275 Glycosyl hydrolase, family 13, catalytic domain;... 0.02 OrthoFinder
XM_002507502.1 MICPUN_51374, 51374 Glycoside hydrolase family 13 protein (SBE2A) 0.03 OrthoFinder
lcl|LHPG02000002.1_cds_PRW60631.1_4500 PRW60631 Starch branching enzyme I 0.02 OrthoFinder
lcl|LHPG02000009.1_cds_PRW56052.1_10358 PRW56052 Starch branching enzyme 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
MF GO:0043169 cation binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004133 glycogen debranching enzyme activity IEP Enrichment
MF GO:0004134 4-alpha-glucanotransferase activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
CC GO:0005669 transcription factor TFIID complex IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006352 DNA-templated transcription, initiation IEP Enrichment
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
CC GO:0030126 COPI vesicle coat IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
CC GO:0090575 RNA polymerase II transcription regulator complex IEP Enrichment
InterPro domains Description Start Stop
IPR006048 A-amylase/branching_C 820 915
IPR004193 Glyco_hydro_13_N 275 361
IPR006047 Glyco_hydro_13_cat_dom 430 499
No external refs found!