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  5. XM_003056380.1

XM_003056380.1 (MicpuC2_45265, 45265)


Aliases : MicpuC2_45265, 45265

Description : Prasinophyte specific chlorophyll a/b-binding protein, chloroplast precursor (LHCP1)


Gene families : OG_01_0000013 (OrthoFinder) Phylogenetic Tree(s): OG0000013_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003056380.1
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
Cre01.g066917 30788321, LHCBM1 Photosynthesis.photophosphorylation.photosystem... 0.02 OrthoFinder
Cre03.g156900 30787808, LHCBM5 Photosynthesis.photophosphorylation.photosystem... 0.03 OrthoFinder
Cre04.g232104 30791553, LHCBM3 Photosynthesis.photophosphorylation.photosystem... 0.02 OrthoFinder
Cre06.g272650 30779881, LHCA8 Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.02 OrthoFinder
Cre06.g278213 30779171, LHCA6 Chlorophyll a-b binding protein P4, chloroplastic... 0.01 OrthoFinder
Cre06.g283050 30779127, LHCA1 Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.04 OrthoFinder
Cre06.g283950 30779716, LHCBM4 Photosynthesis.photophosphorylation.photosystem... 0.02 OrthoFinder
Cre06.g284250 30779962, LHCBM8 Photosynthesis.photophosphorylation.photosystem... 0.03 OrthoFinder
Cre06.g285250 30779463, LHCBM6 Photosynthesis.photophosphorylation.photosystem... 0.02 OrthoFinder
Cre07.g344950 30774737, LHCA9 Photosystem I chlorophyll a/b-binding protein 5,... 0.04 OrthoFinder
Cre11.g467573 30776039, LHCA3 Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.02 OrthoFinder
Cre12.g508750 30791684, LHCA2 Photosystem I chlorophyll a/b-binding protein 6,... 0.02 OrthoFinder
Cre12.g548400 30793460, LHCBM2 Photosynthesis.photophosphorylation.photosystem... 0.02 OrthoFinder
Cre12.g548950 30793494, LHCBM7 Photosynthesis.photophosphorylation.photosystem... 0.02 OrthoFinder
Cre16.g673650 30777655, LHCB5 Photosynthesis.photophosphorylation.photosystem... 0.02 OrthoFinder
Cre16.g687900 30778224, LHCA7 Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.02 OrthoFinder
Cre17.g720250 30782643, LHCB4 Photosynthesis.photophosphorylation.photosystem... 0.01 OrthoFinder
Cz01g23030.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
Cz02g14140.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.06 OrthoFinder
Cz03g26240.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
Cz04g04130.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.05 OrthoFinder
Cz04g09210.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
Cz08g11160.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
Cz09g32070.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
Cz10g10160.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
Cz12g16070.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
Cz16g14150.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
Dusal.0048s00039.1 33189457 Chlorophyll A-B binding protein [Interproscan]. 0.05 OrthoFinder
Dusal.0125s00005.1 33191827 Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
OT_01G04980.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
OT_02G03050.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.04 OrthoFinder
OT_02G04550.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.04 OrthoFinder
OT_03G04590.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
OT_03G04600.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
OT_03G04960.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.04 OrthoFinder
OT_05G03910.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.04 OrthoFinder
OT_07G02590.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.04 OrthoFinder
OT_09G04490.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.04 OrthoFinder
OT_14G01300.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.04 OrthoFinder
OT_16G00460.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.04 OrthoFinder
OT_16G02540.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.04 OrthoFinder
OT_18G01270.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.04 OrthoFinder
PTI_20G01950.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.01 OrthoFinder
Transcript_contig_58645 58645 Chlorophyll A-B binding protein [Interproscan]. 0.06 OrthoFinder
Transcript_contig_59040 59040 Chlorophyll A-B binding protein [Interproscan]. 0.07 OrthoFinder
Transcript_contig_79146 79146 Chlorophyll A-B binding protein [Interproscan]. 0.11 OrthoFinder
UNPLg00080.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
Vocar.0002s0041.1 32890610 Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
Vocar.0002s0042.1 32890769 Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
Vocar.0002s0043.1 32891182 Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
Vocar.0002s0044.1 32890554 Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
Vocar.0002s0046.1 32890744 Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
Vocar.0002s0047.1 32891068 Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
Vocar.0002s0048.1 32891141 Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
Vocar.0002s0050.1 32890818 Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
Vocar.0002s0051.1 32890692 Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
Vocar.0002s0052.1 32890630 Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
Vocar.0002s0055.1 32891143 Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
Vocar.0002s0071.1 32890569 Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
Vocar.0002s0281.1 32890560 Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
Vocar.0002s0333.1 32890723 Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
Vocar.0005s0361.1 32883819 Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
Vocar.0009s0370.1 32893259 Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
Vocar.0011s0017.1 32895358 Chlorophyll A-B binding protein [Interproscan]. 0.01 OrthoFinder
Vocar.0014s0016.1 32888452 Chlorophyll A-B binding protein [Interproscan]. 0.04 OrthoFinder
Vocar.0016s0243.1 32897935 Chlorophyll A-B binding protein [Interproscan]. 0.04 OrthoFinder
Vocar.0018s0037.1 32898532 Chlorophyll A-B binding protein [Interproscan]. 0.07 OrthoFinder
Vocar.0023s0180.1 32883354 Chlorophyll A-B binding protein [Interproscan]. 0.05 OrthoFinder
Vocar.0028s0157.1 32895586 Chlorophyll A-B binding protein [Interproscan]. 0.05 OrthoFinder
Vocar.0709s0001.1 32898457 Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
XM_002507043.1 MICPUN_104693, 104693 Chlorophyll a/b-binding protein, psi-associated,... 0.03 OrthoFinder
XM_002507237.1 MICPUN_55391, 55391 Chlorophyll a/b-binding protein, chloroplast precursor (LHCA5) 0.08 OrthoFinder
XM_002507443.1 MICPUN_54950, 54950 Chlorophyll a/b-binding protein, chloroplast precursor (LHCA2) 0.04 OrthoFinder
lcl|BLLF01000182.1_cds_GFH08749.1_3226 HaLaN_03767, GFH08749 Chlorophyll a-b binding protein, chloroplastic 0.02 OrthoFinder
lcl|BLLF01000518.1_cds_GFH12589.1_7066 HaLaN_08302, GFH12589 Chlorophyll a-b binding protein, chloroplastic 0.01 OrthoFinder
lcl|BLLF01000534.1_cds_GFH12729.1_7206 HaLaN_08471, GFH12729 Chlorophyll a-b binding protein, chloroplastic 0.01 OrthoFinder
lcl|BLLF01000682.1_cds_GFH14061.1_8538 HaLaN_10037, GFH14061 Chlorophyll a-b binding protein, chloroplastic 0.02 OrthoFinder
lcl|BLLF01001042.1_cds_GFH16728.1_11205 HaLaN_13210, GFH16728 Chlorophyll a-b binding protein, chloroplastic 0.01 OrthoFinder
lcl|BLLF01001849.1_cds_GFH21535.1_16012 HaLaN_18860, GFH21535 Chlorophyll a-b binding protein, chloroplastic 0.03 OrthoFinder
lcl|BLLF01002251.1_cds_GFH23349.1_17826 HaLaN_20950, GFH23349 Chlorophyll a-b binding protein, chloroplastic 0.02 OrthoFinder
lcl|BLLF01002812.1_cds_GFH25433.1_19910 HaLaN_23388, GFH25433 Chlorophyll a-b binding protein, chloroplastic 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004418 hydroxymethylbilane synthase activity IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009522 photosystem I IEP Enrichment
CC GO:0009538 photosystem I reaction center IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Enrichment
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Enrichment
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Enrichment
BP GO:0033013 tetrapyrrole metabolic process IEP Enrichment
BP GO:0033014 tetrapyrrole biosynthetic process IEP Enrichment
MF GO:0051213 dioxygenase activity IEP Enrichment
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 81 223
No external refs found!