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  5. XM_003055738.1

XM_003055738.1 (MicpuC2_45207, 45207)


Aliases : MicpuC2_45207, 45207

Description : Chaperonin Cpn60/TCP-1 family [Interproscan].


Gene families : OG_01_0000322 (OrthoFinder) Phylogenetic Tree(s): OG0000322_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003055738.1
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
Cre04.g231222 30791114, CPN60A External stimuli response.temperature.Hsp... 0.02 OrthoFinder
Cre06.g309100 30779697, CPN60C External stimuli response.temperature.Hsp... 0.03 OrthoFinder
Cre17.g741450 30782155, CPN60B1 External stimuli response.temperature.Hsp... 0.02 OrthoFinder
Cz03g15060.t1 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.03 OrthoFinder
Cz09g09030.t1 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.02 OrthoFinder
Dusal.0055s00013.1 33187644 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.03 OrthoFinder
Dusal.0817s00005.1 33195411 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.02 OrthoFinder
EOD29151 No alias Heat shock protein 60 [Ensembl]. 0.01 OrthoFinder
OT_07G02370.1 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.02 OrthoFinder
OT_10G00300.1 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.02 OrthoFinder
OT_12G03000.1 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.03 OrthoFinder
Sro922_g220550.1 Contig2958.g23498 RuBisCO large subunit-binding protein subunit alpha,... 0.02 OrthoFinder
SymbC1.scaffold1.918 1.918 Chaperonin Cpn60/TCP-1 family; Chaperone DnaJ,... 0.01 OrthoFinder
SymbC1.scaffold5.877 5.877 DNA polymerase, Y-family, little finger domain;... 0.01 OrthoFinder
TP06G07750.1 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.03 OrthoFinder
Vocar.0001s1802.1 32884356 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.02 OrthoFinder
Vocar.0005s0032.1 32883856 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.02 OrthoFinder
Vocar.0015s0099.1 32898971 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.02 OrthoFinder
XM_002499843.1 MICPUN_105208, 105208 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61294.1_459 PRW61294 Ru large subunit-binding subunit alpha 0.04 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61354.1_599 PRW61354 Ru large subunit-binding subunit chloroplastic isoform A 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003852 2-isopropylmalate synthase activity IEP Enrichment
MF GO:0004399 histidinol dehydrogenase activity IEP Enrichment
MF GO:0004645 1,4-alpha-oligoglucan phosphorylase activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0004826 phenylalanine-tRNA ligase activity IEP Enrichment
MF GO:0004827 proline-tRNA ligase activity IEP Enrichment
MF GO:0004832 valine-tRNA ligase activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005622 intracellular anatomical structure IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
CC GO:0005783 endoplasmic reticulum IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006432 phenylalanyl-tRNA aminoacylation IEP Enrichment
BP GO:0006433 prolyl-tRNA aminoacylation IEP Enrichment
BP GO:0006438 valyl-tRNA aminoacylation IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006547 histidine metabolic process IEP Enrichment
BP GO:0006551 leucine metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008184 glycogen phosphorylase activity IEP Enrichment
MF GO:0008452 RNA ligase activity IEP Enrichment
BP GO:0008652 cellular amino acid biosynthetic process IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009098 leucine biosynthetic process IEP Enrichment
CC GO:0009579 thylakoid IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0016053 organic acid biosynthetic process IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0031072 heat shock protein binding IEP Enrichment
CC GO:0032040 small-subunit processome IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0044283 small molecule biosynthetic process IEP Enrichment
BP GO:0046394 carboxylic acid biosynthetic process IEP Enrichment
MF GO:0046912 acyltransferase, acyl groups converted into alkyl on transfer IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR002423 Cpn60/TCP-1 62 565
No external refs found!