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  5. XM_003055699.1

XM_003055699.1 (MicpuC2_49408, 49408)


Aliases : MicpuC2_49408, 49408

Description : Chloroplast envelope protein translocase family (TIC55-5)


Gene families : OG_01_0000145 (OrthoFinder) Phylogenetic Tree(s): OG0000145_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003055699.1
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000681.17 tig00000681_g3064.t1 Protein TIC 55, chloroplastic OS=Arabidopsis thaliana 0.01 OrthoFinder
Cre10.g450550 30790419, PAO3 Pheophorbide a oxygenase, chloroplastic OS=Arabidopsis thaliana 0.04 OrthoFinder
Cre13.g583050 30784306 Pheophorbide a oxygenase, chloroplastic OS=Arabidopsis thaliana 0.02 OrthoFinder
Cz01g44120.t1 No alias Rieske [2Fe-2S] iron-sulphur domain; Pheophorbide a... 0.03 OrthoFinder
Vocar.0001s1450.1 32884189 Rieske [2Fe-2S] iron-sulphur domain; Pheophorbide a... 0.03 OrthoFinder
Vocar.0008s0429.1 32897248 Rieske [2Fe-2S] iron-sulphur domain; Pheophorbide a... 0.02 OrthoFinder
Vocar.0015s0171.1 32899184 Rieske [2Fe-2S] iron-sulphur domain [Interproscan]. 0.02 OrthoFinder
XM_002499415.1 MICPUN_56398, 56398 Chloroplast envelope protein translocase family (TIC55-1) 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEA Interproscan
MF GO:0051537 2 iron, 2 sulfur cluster binding IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004109 coproporphyrinogen oxidase activity IEP Enrichment
MF GO:0004417 hydroxyethylthiazole kinase activity IEP Enrichment
BP GO:0006772 thiamine metabolic process IEP Enrichment
BP GO:0006778 porphyrin-containing compound metabolic process IEP Enrichment
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Enrichment
BP GO:0009228 thiamine biosynthetic process IEP Enrichment
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Enrichment
BP GO:0042723 thiamine-containing compound metabolic process IEP Enrichment
BP GO:0042724 thiamine-containing compound biosynthetic process IEP Enrichment
BP GO:0044272 sulfur compound biosynthetic process IEP Enrichment
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Enrichment
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR017941 Rieske_2Fe-2S 91 172
IPR013626 PaO 315 439
No external refs found!