Aliases : MicpuC2_50666, 50666
Description : ABC transporter/cobalt transport family protein
Gene families : OG_01_0000132 (OrthoFinder) Phylogenetic Tree(s): OG0000132_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: XM_003055665.1 | |
Cluster | HCCA: Cluster_23 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cpa|evm.model.tig00000383.51 | tig00000383_g24665.t1 | ABC transporter F family member 1 OS=Arabidopsis thaliana | 0.04 | OrthoFinder | |
Cpa|evm.model.tig00020629.98 | tig00020629_g12419.t1 | ABC transporter F family member 3 OS=Arabidopsis thaliana | 0.02 | OrthoFinder | |
Cre01.g023787 | 30789637 | ABC transporter F family member 1 OS=Arabidopsis thaliana | 0.03 | OrthoFinder | |
Cre01.g034950 | 30788752 | ABC transporter F family member 4 OS=Arabidopsis thaliana | 0.05 | OrthoFinder | |
Cre11.g467781 | 30775790 | ABC transporter F family member 1 OS=Arabidopsis thaliana | 0.02 | OrthoFinder | |
Cz03g13130.t1 | No alias | ABC-transporter extension domain; ABC transporter-like... | 0.04 | OrthoFinder | |
Cz07g32170.t1 | No alias | ABC-transporter extension domain; ABC transporter-like... | 0.02 | OrthoFinder | |
Dusal.0100s00016.1 | 33202465 | ABC transporter-like [Interproscan]. | 0.05 | OrthoFinder | |
EOD04357 | No alias | ABC transporter protein [Ensembl]. | 0.03 | OrthoFinder | |
EOD21710 | No alias | W2 domain; ABC transporter-like; ABC-transporter... | 0.03 | OrthoFinder | |
OT_03G05170.1 | No alias | ABC-transporter extension domain; ABC transporter-like... | 0.01 | OrthoFinder | |
OT_05G02420.1 | No alias | ABC-transporter extension domain; ABC transporter-like;... | 0.07 | OrthoFinder | |
Sro1254_g256400.1 | Contig4319.g32589 | Probable ATP-binding cassette sub-family F member 3 homolog | 0.01 | OrthoFinder | |
Sro365_g127370.1 | Contig3612.g27911 | Tylosin resistance ATP-binding protein TlrC | 0.04 | OrthoFinder | |
TP01G10170.1 | No alias | ABC transporter-like; ABC-transporter extension domain... | 0.02 | OrthoFinder | |
Transcript_contig_55366 | 55366 | ABC-transporter extension domain; ABC transporter-like... | 0.01 | OrthoFinder | |
Transcript_contig_56222 | 56222 | ABC-transporter extension domain; ABC transporter-like... | 0.01 | OrthoFinder | |
Transcript_contig_78244 | 78244 | ABC-transporter extension domain; ABC transporter-like... | 0.04 | OrthoFinder | |
Vocar.0003s0485.1 | 32889188 | ABC-transporter extension domain; ABC transporter-like... | 0.03 | OrthoFinder | |
Vocar.0027s0024.1 | 32887256 | ABC-transporter extension domain; ABC transporter-like... | 0.02 | OrthoFinder | |
XM_002502487.1 | MICPUN_58625, 58625 | ABC-transporter extension domain; ZC3H15/TMA46 family,... | 0.09 | OrthoFinder | |
XM_002503388.1 | MICPUN_83355, 83355 | ATP-binding cassette superfamily | 0.09 | OrthoFinder | |
XM_002505228.1 | MICPUN_62615, 62615 | ABC transporter | 0.05 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005524 | ATP binding | IEA | Interproscan |
MF | GO:0016887 | ATPase | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0001522 | pseudouridine synthesis | IEP | Enrichment |
MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
MF | GO:0003723 | RNA binding | IEP | Enrichment |
MF | GO:0003746 | translation elongation factor activity | IEP | Enrichment |
MF | GO:0003747 | translation release factor activity | IEP | Enrichment |
MF | GO:0003855 | 3-dehydroquinate dehydratase activity | IEP | Enrichment |
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | Enrichment |
MF | GO:0004455 | ketol-acid reductoisomerase activity | IEP | Enrichment |
MF | GO:0004764 | shikimate 3-dehydrogenase (NADP+) activity | IEP | Enrichment |
CC | GO:0005634 | nucleus | IEP | Enrichment |
CC | GO:0005730 | nucleolus | IEP | Enrichment |
BP | GO:0006351 | transcription, DNA-templated | IEP | Enrichment |
BP | GO:0006414 | translational elongation | IEP | Enrichment |
BP | GO:0006415 | translational termination | IEP | Enrichment |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | Enrichment |
MF | GO:0008079 | translation termination factor activity | IEP | Enrichment |
MF | GO:0008135 | translation factor activity, RNA binding | IEP | Enrichment |
BP | GO:0009081 | branched-chain amino acid metabolic process | IEP | Enrichment |
BP | GO:0009082 | branched-chain amino acid biosynthetic process | IEP | Enrichment |
BP | GO:0009451 | RNA modification | IEP | Enrichment |
MF | GO:0009982 | pseudouridine synthase activity | IEP | Enrichment |
BP | GO:0016053 | organic acid biosynthetic process | IEP | Enrichment |
BP | GO:0016070 | RNA metabolic process | IEP | Enrichment |
MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | Enrichment |
MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | Enrichment |
MF | GO:0016779 | nucleotidyltransferase activity | IEP | Enrichment |
MF | GO:0016866 | intramolecular transferase activity | IEP | Enrichment |
BP | GO:0022411 | cellular component disassembly | IEP | Enrichment |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Enrichment |
MF | GO:0031072 | heat shock protein binding | IEP | Enrichment |
CC | GO:0032040 | small-subunit processome | IEP | Enrichment |
BP | GO:0032984 | protein-containing complex disassembly | IEP | Enrichment |
MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | Enrichment |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Enrichment |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Enrichment |
MF | GO:0035596 | methylthiotransferase activity | IEP | Enrichment |
BP | GO:0042254 | ribosome biogenesis | IEP | Enrichment |
CC | GO:0043226 | organelle | IEP | Enrichment |
CC | GO:0043227 | membrane-bounded organelle | IEP | Enrichment |
CC | GO:0043229 | intracellular organelle | IEP | Enrichment |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Enrichment |
BP | GO:0043624 | cellular protein complex disassembly | IEP | Enrichment |
BP | GO:0044085 | cellular component biogenesis | IEP | Enrichment |
BP | GO:0044249 | cellular biosynthetic process | IEP | Enrichment |
MF | GO:0045182 | translation regulator activity | IEP | Enrichment |
MF | GO:0050497 | alkylthioltransferase activity | IEP | Enrichment |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | Enrichment |
MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | Enrichment |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Enrichment |
BP | GO:0097659 | nucleic acid-templated transcription | IEP | Enrichment |
MF | GO:0097747 | RNA polymerase activity | IEP | Enrichment |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Enrichment |
BP | GO:1901576 | organic substance biosynthetic process | IEP | Enrichment |
No external refs found! |