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  5. XM_003055556.1

XM_003055556.1 (MicpuC2_12520, 12520)


Aliases : MicpuC2_12520, 12520

Description : Sel1-like repeat; Tetratricopeptide repeat [Interproscan].


Gene families : OG_01_0000979 (OrthoFinder) Phylogenetic Tree(s): OG0000979_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003055556.1
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
XM_003057704.1 MicpuC2_57277, 57277 Hypothetical protein 0.11 OrthoFinder
XM_003058151.1 MicpuC2_7727, 7727 Sel1-like repeat [Interproscan]. 0.07 OrthoFinder
XM_003060202.1 MicpuC2_59836, 59836 Sel1-like repeat; F-box domain [Interproscan]. 0.04 OrthoFinder
XM_003060245.1 MicpuC2_59930, 59930 Hypothetical protein 0.08 OrthoFinder
XM_003060318.1 MicpuC2_60089, 60089 Hypothetical protein 0.08 OrthoFinder
XM_003060531.1 MicpuC2_7648, 7648 Sel1-like repeat; Tetratricopeptide repeat [Interproscan]. 0.1 OrthoFinder
XM_003064338.1 MicpuC2_23467, 23467 Sel1-like repeat [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Enrichment
MF GO:0004556 alpha-amylase activity IEP Enrichment
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP Enrichment
CC GO:0005576 extracellular region IEP Enrichment
BP GO:0006817 phosphate ion transport IEP Enrichment
MF GO:0016160 amylase activity IEP Enrichment
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Enrichment
MF GO:0030248 cellulose binding IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
InterPro domains Description Start Stop
IPR019734 TPR_repeat 104 128
IPR019734 TPR_repeat 172 196
IPR006597 Sel1-like 50 64
IPR006597 Sel1-like 135 169
IPR006597 Sel1-like 70 101
IPR006597 Sel1-like 203 237
No external refs found!