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  5. XM_003055513.1

XM_003055513.1 (MicpuC2_50339, 50339)


Aliases : MicpuC2_50339, 50339

Description : Sel1-like repeat [Interproscan].


Gene families : OG_01_0000979 (OrthoFinder) Phylogenetic Tree(s): OG0000979_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003055513.1
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
XM_003057704.1 MicpuC2_57277, 57277 Hypothetical protein 0.06 OrthoFinder
XM_003058151.1 MicpuC2_7727, 7727 Sel1-like repeat [Interproscan]. 0.03 OrthoFinder
XM_003060202.1 MicpuC2_59836, 59836 Sel1-like repeat; F-box domain [Interproscan]. 0.03 OrthoFinder
XM_003060245.1 MicpuC2_59930, 59930 Hypothetical protein 0.06 OrthoFinder
XM_003060318.1 MicpuC2_60089, 60089 Hypothetical protein 0.05 OrthoFinder
XM_003060531.1 MicpuC2_7648, 7648 Sel1-like repeat; Tetratricopeptide repeat [Interproscan]. 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004556 alpha-amylase activity IEP Enrichment
CC GO:0005576 extracellular region IEP Enrichment
MF GO:0016160 amylase activity IEP Enrichment
MF GO:0030248 cellulose binding IEP Enrichment
InterPro domains Description Start Stop
IPR006597 Sel1-like 176 191
IPR006597 Sel1-like 193 221
IPR006597 Sel1-like 233 263
No external refs found!